Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85859037

Identifier: 85859037

GI number: 85859037

Start: 1213357

End: 1213815

Strand: Direct

Name: 85859037

Synonym: SYN_00966

Alternate gene names: NA

Gene position: 1213357-1213815 (Clockwise)

Preceding gene: 85859036

Following gene: 85859038

Centisome position: 38.16

GC content: 42.48

Gene sequence:

>459_bases
ATGGATCAGATGAAGAAGGTGATAGCGACCTCGATTTTTGAAGTTTTCGAAAAAATGTTTTTTATTTTTCTTGAACCCGT
GGAGAAAAAAAATGACCTCACGTTTGACATGGAAACAGAAATCAAATTTACAGGCTCTGCTGAAGGGTGCATGAAAATGT
TTTTTTCTGATGGATTGGCTTCATTGATGGCGAGAAACATGCTCAGTCTGGACGACGAAGAAGTGACTGATGCTCTTAAA
GCGGATTGCTCCCGGGAGGCCATCAATATGGTTTGCGGAAATCTCCTGCGAACCTGTGACAGCCGTATAATTTTCAACCT
TTCCATTCCGACGTTTCAAAAGAATCATCCGTCTGATCCCTTTCCCTTTCAACAGAAAGCGCAACTCAATTCATGGCAGT
CTTTATTTGATGTTGATGGAGAAAGTTTGGGCGTCCTGCTGCAGATGCAACGTCCGTAA

Upstream 100 bases:

>100_bases
TTTCGATACGGGGCGAAAGGTTTTATAAAAAAGCCATTTTTACCTGGGGACTTGAAAAAAGTTCTTCATGAAGTGTTAGG
GGTCAATGACGATGGAGACT

Downstream 100 bases:

>100_bases
AACCGGAAGTCGATTGTTTTAATATGAACAGTAAAGCAATAAAACCCTCTTGCGAGTATTTTCTTCTGCCCGGCTATATT
TTTATGAGTCCGGAGCCTTA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDQMKKVIATSIFEVFEKMFFIFLEPVEKKNDLTFDMETEIKFTGSAEGCMKMFFSDGLASLMARNMLSLDDEEVTDALK
ADCSREAINMVCGNLLRTCDSRIIFNLSIPTFQKNHPSDPFPFQQKAQLNSWQSLFDVDGESLGVLLQMQRP

Sequences:

>Translated_152_residues
MDQMKKVIATSIFEVFEKMFFIFLEPVEKKNDLTFDMETEIKFTGSAEGCMKMFFSDGLASLMARNMLSLDDEEVTDALK
ADCSREAINMVCGNLLRTCDSRIIFNLSIPTFQKNHPSDPFPFQQKAQLNSWQSLFDVDGESLGVLLQMQRP
>Mature_152_residues
MDQMKKVIATSIFEVFEKMFFIFLEPVEKKNDLTFDMETEIKFTGSAEGCMKMFFSDGLASLMARNMLSLDDEEVTDALK
ADCSREAINMVCGNLLRTCDSRIIFNLSIPTFQKNHPSDPFPFQQKAQLNSWQSLFDVDGESLGVLLQMQRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17357; Mature: 17357

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQMKKVIATSIFEVFEKMFFIFLEPVEKKNDLTFDMETEIKFTGSAEGCMKMFFSDGLA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHH
SLMARNMLSLDDEEVTDALKADCSREAINMVCGNLLRTCDSRIIFNLSIPTFQKNHPSDP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
FPFQQKAQLNSWQSLFDVDGESLGVLLQMQRP
CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC
>Mature Secondary Structure
MDQMKKVIATSIFEVFEKMFFIFLEPVEKKNDLTFDMETEIKFTGSAEGCMKMFFSDGLA
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCEEECCCHHHHHHHHHHHHHH
SLMARNMLSLDDEEVTDALKADCSREAINMVCGNLLRTCDSRIIFNLSIPTFQKNHPSDP
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCC
FPFQQKAQLNSWQSLFDVDGESLGVLLQMQRP
CCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA