| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is cheR [H]
Identifier: 85859033
GI number: 85859033
Start: 1210763
End: 1211596
Strand: Direct
Name: cheR [H]
Synonym: SYN_00970
Alternate gene names: 85859033
Gene position: 1210763-1211596 (Clockwise)
Preceding gene: 85859032
Following gene: 85859034
Centisome position: 38.08
GC content: 42.45
Gene sequence:
>834_bases ATGATGAATGCATCCGAACTGAGCGATCACGATTTCGAAAGGATCAGTAATCTGATTTATCAGCAGTGCGGCATCAATCT GCATGATGGCAAGAAAGAGCTGGTCAGGACCAGATTGGGACGGAGATTGCGCGAAGGGAACTTCCGGTCATTTTCCGAGT ATTACAAACATGTGACGACGCGGGAGGGGACTGATGAACTCATTATGATGATTGATTCCATCGCTACGAATCTCACCTAT TTTTTCAGGGAAGAAAGCCATTTTCAGAGAGTGCAGATTATCGTTAAATCCCTGTTGGATGATTCTGTCGGGCAAAGGCA CAGGCAACCGGGGTTGAGAATATGGAGTGCCGGATGTTCAACGGGAGAGGAGCCGTATTCACTGGGGATGACCATTAAGG AATCATTGAATGGTTTTCCGGCGGAAGTCAAGATCACGGCTACGGATATATCAACAAAGGTACTGAAAACCGCTGTTAAT GGAGTTTTTTCAATCGAGAAAACAAGAAATATACCCCCGGTGATTTTAAGGAAATATTTTCAACTGGGATACGGGAAATG GGAGGGGTACGTTCGAATCAAGAAAGAAATTCGGGATCTTGTTGAATTTTCAAGATTTAATTTAATGGAGCCCCCTTTTT CAAAATTTAAATTCGACATCATTTTCTGCAGAAATGTCATGATTTATTTTGATAAGCAGACGCAGGAGAATGTTGTCCGG AAATTCTACAACTGTCTGAACAAGGGCGGATATTTTTTTATAGGACACTCTGAAAGTCTTGCCGGTTTGGATAATGCTTT TAAGTATGTCGAGCCCAGTGTTTATCGGAAGTAA
Upstream 100 bases:
>100_bases ATTTCCCTGTCGTTCAAGTATTGTCTTGAAACCGGGATGTCCGTTGCAAGTGTGCCTGGGTGGTCAAGCCTGTGAAAAAA TATTTATTATCTGATTTACC
Downstream 100 bases:
>100_bases GCTATGGGTGACGTGATTGTAAGCATTTCGGATTTTAGAGTGAGCAATAATGTCGGCGACATTCTTGTAACCTACGCGCT GGGTTCCTGCATTGCCGTAG
Product: chemotaxis protein methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MMNASELSDHDFERISNLIYQQCGINLHDGKKELVRTRLGRRLREGNFRSFSEYYKHVTTREGTDELIMMIDSIATNLTY FFREESHFQRVQIIVKSLLDDSVGQRHRQPGLRIWSAGCSTGEEPYSLGMTIKESLNGFPAEVKITATDISTKVLKTAVN GVFSIEKTRNIPPVILRKYFQLGYGKWEGYVRIKKEIRDLVEFSRFNLMEPPFSKFKFDIIFCRNVMIYFDKQTQENVVR KFYNCLNKGGYFFIGHSESLAGLDNAFKYVEPSVYRK
Sequences:
>Translated_277_residues MMNASELSDHDFERISNLIYQQCGINLHDGKKELVRTRLGRRLREGNFRSFSEYYKHVTTREGTDELIMMIDSIATNLTY FFREESHFQRVQIIVKSLLDDSVGQRHRQPGLRIWSAGCSTGEEPYSLGMTIKESLNGFPAEVKITATDISTKVLKTAVN GVFSIEKTRNIPPVILRKYFQLGYGKWEGYVRIKKEIRDLVEFSRFNLMEPPFSKFKFDIIFCRNVMIYFDKQTQENVVR KFYNCLNKGGYFFIGHSESLAGLDNAFKYVEPSVYRK >Mature_277_residues MMNASELSDHDFERISNLIYQQCGINLHDGKKELVRTRLGRRLREGNFRSFSEYYKHVTTREGTDELIMMIDSIATNLTY FFREESHFQRVQIIVKSLLDDSVGQRHRQPGLRIWSAGCSTGEEPYSLGMTIKESLNGFPAEVKITATDISTKVLKTAVN GVFSIEKTRNIPPVILRKYFQLGYGKWEGYVRIKKEIRDLVEFSRFNLMEPPFSKFKFDIIFCRNVMIYFDKQTQENVVR KFYNCLNKGGYFFIGHSESLAGLDNAFKYVEPSVYRK
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=270, Percent_Identity=41.8518518518518, Blast_Score=211, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 32321; Mature: 32321
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNASELSDHDFERISNLIYQQCGINLHDGKKELVRTRLGRRLREGNFRSFSEYYKHVTT CCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC REGTDELIMMIDSIATNLTYFFREESHFQRVQIIVKSLLDDSVGQRHRQPGLRIWSAGCS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC TGEEPYSLGMTIKESLNGFPAEVKITATDISTKVLKTAVNGVFSIEKTRNIPPVILRKYF CCCCCHHCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHH QLGYGKWEGYVRIKKEIRDLVEFSRFNLMEPPFSKFKFDIIFCRNVMIYFDKQTQENVVR HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCEEEEECCCHHHHHHH KFYNCLNKGGYFFIGHSESLAGLDNAFKYVEPSVYRK HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MMNASELSDHDFERISNLIYQQCGINLHDGKKELVRTRLGRRLREGNFRSFSEYYKHVTT CCCCHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC REGTDELIMMIDSIATNLTYFFREESHFQRVQIIVKSLLDDSVGQRHRQPGLRIWSAGCS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC TGEEPYSLGMTIKESLNGFPAEVKITATDISTKVLKTAVNGVFSIEKTRNIPPVILRKYF CCCCCHHCCCCHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHEEHHHHCCCCHHHHHHHH QLGYGKWEGYVRIKKEIRDLVEFSRFNLMEPPFSKFKFDIIFCRNVMIYFDKQTQENVVR HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEEECCEEEEECCCHHHHHHH KFYNCLNKGGYFFIGHSESLAGLDNAFKYVEPSVYRK HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3510184; 9097040; 9278503 [H]