Click here to switch to the map view.

The map label for this gene is 85858839

Identifier: 85858839

GI number: 85858839

Start: 1029802

End: 1030056

Strand: Direct

Name: 85858839

Synonym: SYN_00404

Alternate gene names: NA

Gene position: 1029802-1030056 (Clockwise)

Preceding gene: 85858838

Following gene: 85858841

Centisome position: 32.39

GC content: 41.96

Gene sequence:

>255_bases
TTGCGCCGGATGCAAGGCAGCCGAATAAAAATCTCATCAGAATCAGCAGTGAGTCACAAATCCCTTTTCAATCCGGGGGA
AATCGCCGATGGGTTGAAAAGGGATTTTTCTCGTGCCGCATTGATTATACAAGGCCGTTATTCCTATACTTCCTTCCACA
AAAAACAGCTTTTCATCCGTGTTGTTTTTGAGAAATTTGTTGACATACAAAATCAATCACATTATATTGCAACCCGCCTG
CAGGAATTACACTGA

Upstream 100 bases:

>100_bases
ATTACGGCGGAAAGAAATCCTGCGCGCTGGAGTCCAGACAGAAAGAGGCGGCCGGTTCTTCCAGCGAGACCCCTTCGTGC
GGTGGTGGCGATTCATCCTG

Downstream 100 bases:

>100_bases
AGCAGGGTTGGAGAACCGATCTTTTTAACAGACCGCACTGGGGAATCGTTCAATGGTAGGACAACGGACTCTGACTCCGT
GAATATAGGTTCGAATCCTG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MRRMQGSRIKISSESAVSHKSLFNPGEIADGLKRDFSRAALIIQGRYSYTSFHKKQLFIRVVFEKFVDIQNQSHYIATRL
QELH

Sequences:

>Translated_84_residues
MRRMQGSRIKISSESAVSHKSLFNPGEIADGLKRDFSRAALIIQGRYSYTSFHKKQLFIRVVFEKFVDIQNQSHYIATRL
QELH
>Mature_84_residues
MRRMQGSRIKISSESAVSHKSLFNPGEIADGLKRDFSRAALIIQGRYSYTSFHKKQLFIRVVFEKFVDIQNQSHYIATRL
QELH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9813; Mature: 9813

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMQGSRIKISSESAVSHKSLFNPGEIADGLKRDFSRAALIIQGRYSYTSFHKKQLFIR
CCCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
VVFEKFVDIQNQSHYIATRLQELH
HHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRRMQGSRIKISSESAVSHKSLFNPGEIADGLKRDFSRAALIIQGRYSYTSFHKKQLFIR
CCCCCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
VVFEKFVDIQNQSHYIATRLQELH
HHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA