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The map label for this gene is 85858768

Identifier: 85858768

GI number: 85858768

Start: 959759

End: 960007

Strand: Direct

Name: 85858768

Synonym: SYN_02733

Alternate gene names: NA

Gene position: 959759-960007 (Clockwise)

Preceding gene: 85858767

Following gene: 85858769

Centisome position: 30.19

GC content: 52.21

Gene sequence:

>249_bases
ATGACGGAGAAAAGAATATTGAAAAACAAAGCAGCGACGGCGGCGGATATTGGCGTCGCTATCAGAAAAAAGCGCAAGGA
AGACGGTTTGACCCTGGCTGATGCAGCAGCCTTATGCGGTGTCGGGTACAGATTCATGTCCGATCTGGAAAACGGCAAAG
CGACGGCGCAGGTTGGGAAGGTTCTGCAGGTTCTGACGGCGCTGGGGCTCGATGTTTACATCGAATCAAGGAGCTGGCCG
AATGAATAA

Upstream 100 bases:

>100_bases
ATATATGGAGGCATGAAAACATGCATTTCTTTAATTATTCCCAACCGGGAATATATTTCTTGACGATTCCTCTATAAACG
ATTATTATTCCCGAAAGGGA

Downstream 100 bases:

>100_bases
AGAGGTCGGCATGGATAATCCTGGTCTGGATGTCTATCTCCGGGATCAAAAAATCGGACGGCTCTGGCTGGATGATAAAA
GACGCTTTGTGTTTCAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MTEKRILKNKAATAADIGVAIRKKRKEDGLTLADAAALCGVGYRFMSDLENGKATAQVGKVLQVLTALGLDVYIESRSWP
NE

Sequences:

>Translated_82_residues
MTEKRILKNKAATAADIGVAIRKKRKEDGLTLADAAALCGVGYRFMSDLENGKATAQVGKVLQVLTALGLDVYIESRSWP
NE
>Mature_81_residues
TEKRILKNKAATAADIGVAIRKKRKEDGLTLADAAALCGVGYRFMSDLENGKATAQVGKVLQVLTALGLDVYIESRSWPN
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR017507 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8851; Mature: 8720

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKRILKNKAATAADIGVAIRKKRKEDGLTLADAAALCGVGYRFMSDLENGKATAQVGK
CCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLQVLTALGLDVYIESRSWPNE
HHHHHHHHCHHEEECCCCCCCC
>Mature Secondary Structure 
TEKRILKNKAATAADIGVAIRKKRKEDGLTLADAAALCGVGYRFMSDLENGKATAQVGK
CCHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VLQVLTALGLDVYIESRSWPNE
HHHHHHHHCHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]