Click here to switch to the map view.

The map label for this gene is 85858727

Identifier: 85858727

GI number: 85858727

Start: 907312

End: 908124

Strand: Direct

Name: 85858727

Synonym: SYN_00195

Alternate gene names: NA

Gene position: 907312-908124 (Clockwise)

Preceding gene: 85858722

Following gene: 85858728

Centisome position: 28.54

GC content: 57.56

Gene sequence:

>813_bases
ATGAGTAAGAAGTCGCCCGGCCGGATCATCACCCTTCTGACGGACTTCGGCCTTCGGGATGCCTATGTGGGCGTCATGAA
GGGCGTTATTGCCGGCATTGCTCCCAACGTGAGGATTATCGATCTGACCCATGGCATCCCGCCACAGGATATCCGGGCGG
CCGGTTTCTGTCTGCTTACGGCTTACCCCTTCTTTCCGCAGGAAACCATACATGTGGCTGTTGTCGATCCGGGAGTGGGT
ACGGAGAGAAGGGCCGTGGCCATCGCGCTGGCCGAGGCTGTTCTGGTCGGGCCTGACAATGGGATTTTCACCGGGCTTCT
TCAGCAGAAGGTCGTGAAAAGCGCCGTGGCTTTGGATCGATCCGAATTCTGGCTGTCAGTGCGTCCCGAGTTCACCTTTC
ATGGGCGGGATATCTTCGCCCCCGCGGCCGCGCATCTGGCTTCAGGGGCAGCCCTCTCCAGGCTGGGTACGCCCATTGAT
CCCGACACGCTGGTTCGTCTGGAACTTCCCGCCTGGGCGGAAACTGAAGACGGATTTTCCGGGAATATTCAGTATGCCGA
CGCTTTCGGCAACCTGGTTACGAATATTCCCGGAAGCCTCGTCGCAGGAAAGATGTGGAAAATCAAGACAGCCGATCTTG
AAATCCCCGGGAAAAAGACTTATGAAGATGTTCCCTCCGGAGTGCTGCTGGCTCTGGCGGGCAGCCACGGGTTTTTGGAA
ATCGCGGCAAACAGCGGAAACGCCCGTGTCCTGCTGTCGATGAATGTCGGTGATCCTGTTGAGGTTCTGCTTGTCACATC
GACGCGGAAATGA

Upstream 100 bases:

>100_bases
CTATTTCATCGGGATTGTTCCGATTCGCTTCCTTCTGATGCAGGATCTGCTTTCTGTGAACTGCGAAAAAAAACGGAACA
AGGAAGGGAATTCAAGGCGC

Downstream 100 bases:

>100_bases
GGCAAATCTCTGCTGCAGAAAGACAACGCTAATGAATCAAACTCTGACCGATCTCTTCAGAATAATAAAACTTCCCGCCT
TTTTGACAGTTTATCTCGTC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSKKSPGRIITLLTDFGLRDAYVGVMKGVIAGIAPNVRIIDLTHGIPPQDIRAAGFCLLTAYPFFPQETIHVAVVDPGVG
TERRAVAIALAEAVLVGPDNGIFTGLLQQKVVKSAVALDRSEFWLSVRPEFTFHGRDIFAPAAAHLASGAALSRLGTPID
PDTLVRLELPAWAETEDGFSGNIQYADAFGNLVTNIPGSLVAGKMWKIKTADLEIPGKKTYEDVPSGVLLALAGSHGFLE
IAANSGNARVLLSMNVGDPVEVLLVTSTRK

Sequences:

>Translated_270_residues
MSKKSPGRIITLLTDFGLRDAYVGVMKGVIAGIAPNVRIIDLTHGIPPQDIRAAGFCLLTAYPFFPQETIHVAVVDPGVG
TERRAVAIALAEAVLVGPDNGIFTGLLQQKVVKSAVALDRSEFWLSVRPEFTFHGRDIFAPAAAHLASGAALSRLGTPID
PDTLVRLELPAWAETEDGFSGNIQYADAFGNLVTNIPGSLVAGKMWKIKTADLEIPGKKTYEDVPSGVLLALAGSHGFLE
IAANSGNARVLLSMNVGDPVEVLLVTSTRK
>Mature_269_residues
SKKSPGRIITLLTDFGLRDAYVGVMKGVIAGIAPNVRIIDLTHGIPPQDIRAAGFCLLTAYPFFPQETIHVAVVDPGVGT
ERRAVAIALAEAVLVGPDNGIFTGLLQQKVVKSAVALDRSEFWLSVRPEFTFHGRDIFAPAAAHLASGAALSRLGTPIDP
DTLVRLELPAWAETEDGFSGNIQYADAFGNLVTNIPGSLVAGKMWKIKTADLEIPGKKTYEDVPSGVLLALAGSHGFLEI
AANSGNARVLLSMNVGDPVEVLLVTSTRK

Specific function: Unknown

COG id: COG1912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002747
- InterPro:   IPR023227
- InterPro:   IPR023228 [H]

Pfam domain/function: PF01887 DUF62 [H]

EC number: NA

Molecular weight: Translated: 28621; Mature: 28490

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKSPGRIITLLTDFGLRDAYVGVMKGVIAGIAPNVRIIDLTHGIPPQDIRAAGFCLLT
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCEEEEE
AYPFFPQETIHVAVVDPGVGTERRAVAIALAEAVLVGPDNGIFTGLLQQKVVKSAVALDR
ECCCCCCCEEEEEEECCCCCCCHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
SEFWLSVRPEFTFHGRDIFAPAAAHLASGAALSRLGTPIDPDTLVRLELPAWAETEDGFS
CCEEEEECCCEEECCCEECCHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC
GNIQYADAFGNLVTNIPGSLVAGKMWKIKTADLEIPGKKTYEDVPSGVLLALAGSHGFLE
CCEEEHHHHHHHHHCCCCCHHCCCEEEEEECCEECCCCCCHHHCCCCEEEEEECCCCEEE
IAANSGNARVLLSMNVGDPVEVLLVTSTRK
EEECCCCEEEEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure 
SKKSPGRIITLLTDFGLRDAYVGVMKGVIAGIAPNVRIIDLTHGIPPQDIRAAGFCLLT
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCEEEEE
AYPFFPQETIHVAVVDPGVGTERRAVAIALAEAVLVGPDNGIFTGLLQQKVVKSAVALDR
ECCCCCCCEEEEEEECCCCCCCHHEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC
SEFWLSVRPEFTFHGRDIFAPAAAHLASGAALSRLGTPIDPDTLVRLELPAWAETEDGFS
CCEEEEECCCEEECCCEECCHHHHHHHCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCC
GNIQYADAFGNLVTNIPGSLVAGKMWKIKTADLEIPGKKTYEDVPSGVLLALAGSHGFLE
CCEEEHHHHHHHHHCCCCCHHCCCEEEEEECCEECCCCCCHHHCCCCEEEEEECCCCEEE
IAANSGNARVLLSMNVGDPVEVLLVTSTRK
EEECCCCEEEEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]