| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is tolQ [H]
Identifier: 85858717
GI number: 85858717
Start: 896598
End: 897344
Strand: Direct
Name: tolQ [H]
Synonym: SYN_00185
Alternate gene names: 85858717
Gene position: 896598-897344 (Clockwise)
Preceding gene: 85858716
Following gene: 85858718
Centisome position: 28.2
GC content: 54.08
Gene sequence:
>747_bases GTGAAAGAACTTGCATCGGTCAACACCGTTGATCTGGGAGGGCAATTGCACGGCAGTGTGCTAAGCATGGTCATGGACGC GGGTCTTCTCGTTCAGTTTGTGCTGCTTGTCCTGCTGCTGTTTTCCGTCGTTTCCTGGGCCATCATTGTGACCAAGTACC GGAGTATCCGAAAGGTCAACGCGGAAAACAGTCTTTTTCTGGACGCTTATATGAAATGCAGCAATCTGGCGGATGTCCTT CCGGAAGCCAAAAAATATTCCTCTTCGACTCTTGCCGGGGTGTTCCGTTCCGGTTATGCGGAGCTTGTTAATTTTGCAAA GGCAACCCAGGGGGCGTCTTTCCGGGATCGTGATGATGCCGTCCCGAGCCCGGAAATCAAGGGCCTCGATAATGTGGAGC GGGCGCTGAATCGGGCATGCAGTGCGGAAGCCACCAAACTGGAAGCGGCACTGGGGTTCCTCGCCACTACCGGCAGCGCA AGTCCTTTCATCGGCCTGTTCGGGACGGTATGGGGGATCATGGATACTTTCCGCGGTATCGGTTTTCAGGGGTCGGCCAC CCTGGCGGTTGTCGCGCCGGGCATTTCCGAAGCTCTGATCGCGACGGCGGCGGGGCTTGCCGCGGCAATTCCGGCGGTTA TTTTCTATAATTACTATCTGAATCGCGTCAAACTCATGACTCTGGAAATGGATCACTTCGCGTCAGAATTGATCAACATT GTCGAACGCTATTATATTAAAGGCTGA
Upstream 100 bases:
>100_bases AAGGATGCCGCTGGAAAATGGCATATTGACAAGGCCTCCTTTTTTCATTAGACAATAGCCTCCATGCCAATATTTGTTTA CAGGGAGTAAAAAGTAAAAA
Downstream 100 bases:
>100_bases AAACTGAAAGTTTGGAGGTTTCAGTATTCAATATGCGTTACTCGCGAAAAAGATCTTTTACCGACGGGCGGCCCATGGCG GAAATCAACGTCACTCCCCT
Product: tolQ protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MKELASVNTVDLGGQLHGSVLSMVMDAGLLVQFVLLVLLLFSVVSWAIIVTKYRSIRKVNAENSLFLDAYMKCSNLADVL PEAKKYSSSTLAGVFRSGYAELVNFAKATQGASFRDRDDAVPSPEIKGLDNVERALNRACSAEATKLEAALGFLATTGSA SPFIGLFGTVWGIMDTFRGIGFQGSATLAVVAPGISEALIATAAGLAAAIPAVIFYNYYLNRVKLMTLEMDHFASELINI VERYYIKG
Sequences:
>Translated_248_residues MKELASVNTVDLGGQLHGSVLSMVMDAGLLVQFVLLVLLLFSVVSWAIIVTKYRSIRKVNAENSLFLDAYMKCSNLADVL PEAKKYSSSTLAGVFRSGYAELVNFAKATQGASFRDRDDAVPSPEIKGLDNVERALNRACSAEATKLEAALGFLATTGSA SPFIGLFGTVWGIMDTFRGIGFQGSATLAVVAPGISEALIATAAGLAAAIPAVIFYNYYLNRVKLMTLEMDHFASELINI VERYYIKG >Mature_248_residues MKELASVNTVDLGGQLHGSVLSMVMDAGLLVQFVLLVLLLFSVVSWAIIVTKYRSIRKVNAENSLFLDAYMKCSNLADVL PEAKKYSSSTLAGVFRSGYAELVNFAKATQGASFRDRDDAVPSPEIKGLDNVERALNRACSAEATKLEAALGFLATTGSA SPFIGLFGTVWGIMDTFRGIGFQGSATLAVVAPGISEALIATAAGLAAAIPAVIFYNYYLNRVKLMTLEMDHFASELINI VERYYIKG
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=227, Percent_Identity=38.7665198237885, Blast_Score=143, Evalue=9e-36, Organism=Escherichia coli, GI1789381, Length=212, Percent_Identity=37.2641509433962, Blast_Score=112, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 26624; Mature: 26624
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELASVNTVDLGGQLHGSVLSMVMDAGLLVQFVLLVLLLFSVVSWAIIVTKYRSIRKVN CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AENSLFLDAYMKCSNLADVLPEAKKYSSSTLAGVFRSGYAELVNFAKATQGASFRDRDDA CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VPSPEIKGLDNVERALNRACSAEATKLEAALGFLATTGSASPFIGLFGTVWGIMDTFRGI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC GFQGSATLAVVAPGISEALIATAAGLAAAIPAVIFYNYYLNRVKLMTLEMDHFASELINI CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH VERYYIKG HHHHHCCC >Mature Secondary Structure MKELASVNTVDLGGQLHGSVLSMVMDAGLLVQFVLLVLLLFSVVSWAIIVTKYRSIRKVN CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AENSLFLDAYMKCSNLADVLPEAKKYSSSTLAGVFRSGYAELVNFAKATQGASFRDRDDA CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VPSPEIKGLDNVERALNRACSAEATKLEAALGFLATTGSASPFIGLFGTVWGIMDTFRGI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC GFQGSATLAVVAPGISEALIATAAGLAAAIPAVIFYNYYLNRVKLMTLEMDHFASELINI CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH VERYYIKG HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]