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The map label for this gene is korB [H]

Identifier: 85858711

GI number: 85858711

Start: 891356

End: 892180

Strand: Direct

Name: korB [H]

Synonym: SYN_03163

Alternate gene names: 85858711

Gene position: 891356-892180 (Clockwise)

Preceding gene: 85858710

Following gene: 85858712

Centisome position: 28.04

GC content: 56.48

Gene sequence:

>825_bases
ATGATGAAGATCAATGATATTGCCTGGTGTCCCGGTTGCGGCAATTTTCTCATTCGCGATGCCCTGGAAGGCGCGTTGAC
GGAACTGGCCATCCCACCGCGGGAGATTGTACTGACTTCCGGAATCGGTCAGGCGGCAAAGATGCCCCAGTATCTGAAAG
TGAATTATTTTAACGGATTGCATGGCCGGGCTTTGCCGCCGGCGGTGGGGATCAAACTTGCCAGACCGGAGCTGACCGTC
ATTGCCGTTTCCGGAGACGGATGCAATTACGGGGAAGGGGGCAACCATTTTCTCCATACCCTGCGGAAGAATCTCGATAT
CACGATCCTGACGTGCAACAATCAGGTCTATGGACTGACCAAGGGACAGAGCTCCCCCACCACGGACCGCAACACGGCGA
ACATGCTGGATCCGCGGGGCAATGAAAACGAGCCGCTCAATCCCCTGGCCGTGGCTGTCGCAGTCGGAGCCCCCTTTGTG
GCCAGAGGGTTTGCCGGTGAAAAGGATCACCTGAAGGAGCTTCTTAAAGAGGCCATCCGCTTCCGGGGGACGGCGGTCGT
TGATATTCTTCAGCCCTGCGTCACTTTCAATAAGGTCAACACCTTTGCTTATTACCGGCAGAGGGTTTATCGGCTGGACG
TTCCCGGAAAAGATCGCCGGGAAGCCCTGGAGATCGCCGGGATCTGGGGGGAACGAATTCCCATTGGCGTCATCCTGAGA
GACGAAACTCGACCTGTCCGGGAGCCGGCCGGACGAATTTTTCAGAATTCCGTGACTTCCGGGATGATGGAGATGCTGCT
GCGGACTCACTCCAGTGCAATCTGA

Upstream 100 bases:

>100_bases
TGGCTGACGACCTGATCCTGAAGTACAACGGATTGTGCTTTTCAGTAAAGGAGCTTTATGACGAAGTCATGAACAGGCTT
TCCGGAGATGGAGGTACAAA

Downstream 100 bases:

>100_bases
CGGACATGTTGAATATCAGCAATGCTGACTGGTCTCTTTTTTCGTCGTGCTGGAACTGACGGCAGGGATAAGGATTTTTT
TATGCGCACCTTGACTTGTA

Product: 2-oxoacid ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MMKINDIAWCPGCGNFLIRDALEGALTELAIPPREIVLTSGIGQAAKMPQYLKVNYFNGLHGRALPPAVGIKLARPELTV
IAVSGDGCNYGEGGNHFLHTLRKNLDITILTCNNQVYGLTKGQSSPTTDRNTANMLDPRGNENEPLNPLAVAVAVGAPFV
ARGFAGEKDHLKELLKEAIRFRGTAVVDILQPCVTFNKVNTFAYYRQRVYRLDVPGKDRREALEIAGIWGERIPIGVILR
DETRPVREPAGRIFQNSVTSGMMEMLLRTHSSAI

Sequences:

>Translated_274_residues
MMKINDIAWCPGCGNFLIRDALEGALTELAIPPREIVLTSGIGQAAKMPQYLKVNYFNGLHGRALPPAVGIKLARPELTV
IAVSGDGCNYGEGGNHFLHTLRKNLDITILTCNNQVYGLTKGQSSPTTDRNTANMLDPRGNENEPLNPLAVAVAVGAPFV
ARGFAGEKDHLKELLKEAIRFRGTAVVDILQPCVTFNKVNTFAYYRQRVYRLDVPGKDRREALEIAGIWGERIPIGVILR
DETRPVREPAGRIFQNSVTSGMMEMLLRTHSSAI
>Mature_274_residues
MMKINDIAWCPGCGNFLIRDALEGALTELAIPPREIVLTSGIGQAAKMPQYLKVNYFNGLHGRALPPAVGIKLARPELTV
IAVSGDGCNYGEGGNHFLHTLRKNLDITILTCNNQVYGLTKGQSSPTTDRNTANMLDPRGNENEPLNPLAVAVAVGAPFV
ARGFAGEKDHLKELLKEAIRFRGTAVVDILQPCVTFNKVNTFAYYRQRVYRLDVPGKDRREALEIAGIWGERIPIGVILR
DETRPVREPAGRIFQNSVTSGMMEMLLRTHSSAI

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 30079; Mature: 30079

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKINDIAWCPGCGNFLIRDALEGALTELAIPPREIVLTSGIGQAAKMPQYLKVNYFNGL
CCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHCCCCEEEEEECCCC
HGRALPPAVGIKLARPELTVIAVSGDGCNYGEGGNHFLHTLRKNLDITILTCNNQVYGLT
CCCCCCHHHCEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCEEEEEE
KGQSSPTTDRNTANMLDPRGNENEPLNPLAVAVAVGAPFVARGFAGEKDHLKELLKEAIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHCCCHHHHCCCCCHHHHHHHHHHHHH
FRGTAVVDILQPCVTFNKVNTFAYYRQRVYRLDVPGKDRREALEIAGIWGERIPIGVILR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEE
DETRPVREPAGRIFQNSVTSGMMEMLLRTHSSAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKINDIAWCPGCGNFLIRDALEGALTELAIPPREIVLTSGIGQAAKMPQYLKVNYFNGL
CCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCHHEEEECCCCHHHCCCCEEEEEECCCC
HGRALPPAVGIKLARPELTVIAVSGDGCNYGEGGNHFLHTLRKNLDITILTCNNQVYGLT
CCCCCCHHHCEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCEEEEEE
KGQSSPTTDRNTANMLDPRGNENEPLNPLAVAVAVGAPFVARGFAGEKDHLKELLKEAIR
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHCCCHHHHCCCCCHHHHHHHHHHHHH
FRGTAVVDILQPCVTFNKVNTFAYYRQRVYRLDVPGKDRREALEIAGIWGERIPIGVILR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEE
DETRPVREPAGRIFQNSVTSGMMEMLLRTHSSAI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]