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The map label for this gene is 85858709

Identifier: 85858709

GI number: 85858709

Start: 889651

End: 890334

Strand: Direct

Name: 85858709

Synonym: SYN_03161

Alternate gene names: NA

Gene position: 889651-890334 (Clockwise)

Preceding gene: 85858704

Following gene: 85858710

Centisome position: 27.98

GC content: 55.26

Gene sequence:

>684_bases
GTGCAAGGGGCAAATCGCCATGATAAAGGGCAGACTGCTCGAGTCTGCTCGAAGGAGGCGCTTATGGAATGCAATCTTTT
AGTTGGAGGGCAGGCCGGACAGGGGCTGGCATCCATCGAAAATGAATTGACGGATCTTCTCTTTCGTCTGGGTTATCATT
TTTTTGCCACCAAATTTTACATGTCCCGAATCCGTGGGGGTCACAACGAGCATCTGTTCCGGGTTGCGGAGGAACCGGTT
CATGCCCTGAGTGGCGAACCCTGGGATGTGGTGGTCGGGTTGGACGAAGAAACGGAAAGGCTGCACAGGGCGGACCTGAG
CGCCCATGGAATCTGCATCTCCATTGACGGGATTCGGGAAATCGAAAAAGCGGCAAAAGAGCACTTTCGCAATGTTAAGA
TGAGCAACAACATCCTGGTCGGCCTGCTTCTCAATGTGCTGGGGGTGACGTCGGAGAACCTGGGGGCTCTGGTGAAGGAA
GAGGAGAAAATGGCTCTTCTGGTGGCCGGGATGGACTTTGCGGAACGCTGGAAAATGGCCGGCCGGTTCGCCCTGATGCC
GCGGGCGGTTAATACATTAAAATTCGATGGGAATTCCGCCCTGGGATTCGGCGCGCTTCTGGGAGGCTGCCAGTTTGTTG
CCGGCTATCCCATGACCCGGCCACATCGCTGCAGATGTATCTGA

Upstream 100 bases:

>100_bases
TTTCCCTTGTCCGGCTGTTTTCAAGGGGGGCGTTCAGGGGCGTGGAGTTCATAGACCATGCGCTCGATGATTCTGATCTT
TTCGTTGGAAAACAAACAGA

Downstream 100 bases:

>100_bases
CCCGGGCTGCCCTTGAGATGCCCGTGCATTTCGAACAGGCCGAGGACGAAATCTCCGCCCTCAACACCGCCCTGGGGGCG
TCTTACGCCGGGCTGCGGTC

Product: pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases subunit gamma

Products: succinyl-CoA; CO2; reduced ferredoxin

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQGANRHDKGQTARVCSKEALMECNLLVGGQAGQGLASIENELTDLLFRLGYHFFATKFYMSRIRGGHNEHLFRVAEEPV
HALSGEPWDVVVGLDEETERLHRADLSAHGICISIDGIREIEKAAKEHFRNVKMSNNILVGLLLNVLGVTSENLGALVKE
EEKMALLVAGMDFAERWKMAGRFALMPRAVNTLKFDGNSALGFGALLGGCQFVAGYPMTRPHRCRCI

Sequences:

>Translated_227_residues
MQGANRHDKGQTARVCSKEALMECNLLVGGQAGQGLASIENELTDLLFRLGYHFFATKFYMSRIRGGHNEHLFRVAEEPV
HALSGEPWDVVVGLDEETERLHRADLSAHGICISIDGIREIEKAAKEHFRNVKMSNNILVGLLLNVLGVTSENLGALVKE
EEKMALLVAGMDFAERWKMAGRFALMPRAVNTLKFDGNSALGFGALLGGCQFVAGYPMTRPHRCRCI
>Mature_227_residues
MQGANRHDKGQTARVCSKEALMECNLLVGGQAGQGLASIENELTDLLFRLGYHFFATKFYMSRIRGGHNEHLFRVAEEPV
HALSGEPWDVVVGLDEETERLHRADLSAHGICISIDGIREIEKAAKEHFRNVKMSNNILVGLLLNVLGVTSENLGALVKE
EEKMALLVAGMDFAERWKMAGRFALMPRAVNTLKFDGNSALGFGALLGGCQFVAGYPMTRPHRCRCI

Specific function: Unknown

COG id: COG1014

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.7.3

Molecular weight: Translated: 25054; Mature: 25054

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGANRHDKGQTARVCSKEALMECNLLVGGQAGQGLASIENELTDLLFRLGYHFFATKFY
CCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MSRIRGGHNEHLFRVAEEPVHALSGEPWDVVVGLDEETERLHRADLSAHGICISIDGIRE
HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEECCHHH
IEKAAKEHFRNVKMSNNILVGLLLNVLGVTSENLGALVKEEEKMALLVAGMDFAERWKMA
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHC
GRFALMPRAVNTLKFDGNSALGFGALLGGCQFVAGYPMTRPHRCRCI
CCCEECCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGANRHDKGQTARVCSKEALMECNLLVGGQAGQGLASIENELTDLLFRLGYHFFATKFY
CCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MSRIRGGHNEHLFRVAEEPVHALSGEPWDVVVGLDEETERLHRADLSAHGICISIDGIRE
HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCEEEEECCHHH
IEKAAKEHFRNVKMSNNILVGLLLNVLGVTSENLGALVKEEEKMALLVAGMDFAERWKMA
HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEECCCHHHHHHHC
GRFALMPRAVNTLKFDGNSALGFGALLGGCQFVAGYPMTRPHRCRCI
CCCEECCHHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-oxoglutarate; CoA; oxidized ferredoxin

Specific reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA