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The map label for this gene is lolA [H]

Identifier: 85858682

GI number: 85858682

Start: 859329

End: 860042

Strand: Direct

Name: lolA [H]

Synonym: SYN_00884

Alternate gene names: 85858682

Gene position: 859329-860042 (Clockwise)

Preceding gene: 85858681

Following gene: 85858683

Centisome position: 27.03

GC content: 47.62

Gene sequence:

>714_bases
ATGATCATGAATTATAATGAGAACCAAAAAAGATGTTTTTGCCGCGGAAGGATCATCCTCTCTGTTCTGGTTTTCCTCGG
CATTTTGTCGTGGGGGAGCGGCTCTCTTCAGGCGGCGGAGCCCCTGTCCCTTTCCGCCCTGATCAGCCGGATGCAGGTGG
CCTATGAGCGGACGCGCGATCTGAAGGCGTCATTTATTCAGGAAGTATCTCTGAAATCCATGGGAAGAGCGGAACGGGAA
GAAGGAATCCTTTATCTGAAGAATCCCAAACGGATGTTGTGGGATTACCACAAGCCGCAAATGAAAAAGCTTGTCGTCAA
TCCTCAGAAAGCCTGGCTCTATGTTCCTGAGGATCATGTAGTTTATGTCCAGAACGCCGATCAGATTTTCAAATCCAAAA
TGGCCGTTCGCTTTCTTTCTGGCATGGGTAAGCTCCAGGAAGATTTTTCGATCCGTTTTGCTGCATCAGGGGCCGTCGAT
AAGGAAGGGAATTATCAGTTGACGCTGGTCCCGAAGAGGCCCGGATTGGGAACCGATCAACTCAACCTGACCGTGGATAA
AAAAAGTTATCAAATTATAGAGGGAAGCTTTACCGATACATATGGGAATGAAACTCGGATTCAATTCCGGAACATCAGAG
TGAATAATCGGTTATCCGATAGCCTGTTCAACTTCAGGGTTCCAACGGGAGTGGAAGTATTTAACATGCCCTGA

Upstream 100 bases:

>100_bases
AATGATTACGGATATATATCTCTTTGATATCGAATTTCTTGAAAAAATGGGGAAGCCGGTGGCGTATCAACAATGTATAC
AGTAAAGGGCTGATTTTTCT

Downstream 100 bases:

>100_bases
GACGCCATTATTTCAATCCCATATCAAAGCGTTCTCTGCCGAGACTTCGTTATCGGATTCGCTGCGTACGCTTCAGTCCT
TCTTCGTCGCCTATGCCTCG

Product: outer membrane lipoprotein carrier protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIMNYNENQKRCFCRGRIILSVLVFLGILSWGSGSLQAAEPLSLSALISRMQVAYERTRDLKASFIQEVSLKSMGRAERE
EGILYLKNPKRMLWDYHKPQMKKLVVNPQKAWLYVPEDHVVYVQNADQIFKSKMAVRFLSGMGKLQEDFSIRFAASGAVD
KEGNYQLTLVPKRPGLGTDQLNLTVDKKSYQIIEGSFTDTYGNETRIQFRNIRVNNRLSDSLFNFRVPTGVEVFNMP

Sequences:

>Translated_237_residues
MIMNYNENQKRCFCRGRIILSVLVFLGILSWGSGSLQAAEPLSLSALISRMQVAYERTRDLKASFIQEVSLKSMGRAERE
EGILYLKNPKRMLWDYHKPQMKKLVVNPQKAWLYVPEDHVVYVQNADQIFKSKMAVRFLSGMGKLQEDFSIRFAASGAVD
KEGNYQLTLVPKRPGLGTDQLNLTVDKKSYQIIEGSFTDTYGNETRIQFRNIRVNNRLSDSLFNFRVPTGVEVFNMP
>Mature_237_residues
MIMNYNENQKRCFCRGRIILSVLVFLGILSWGSGSLQAAEPLSLSALISRMQVAYERTRDLKASFIQEVSLKSMGRAERE
EGILYLKNPKRMLWDYHKPQMKKLVVNPQKAWLYVPEDHVVYVQNADQIFKSKMAVRFLSGMGKLQEDFSIRFAASGAVD
KEGNYQLTLVPKRPGLGTDQLNLTVDKKSYQIIEGSFTDTYGNETRIQFRNIRVNNRLSDSLFNFRVPTGVEVFNMP

Specific function: Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the l

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lolA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564
- InterPro:   IPR018323 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 27202; Mature: 27202

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMNYNENQKRCFCRGRIILSVLVFLGILSWGSGSLQAAEPLSLSALISRMQVAYERTRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LKASFIQEVSLKSMGRAEREEGILYLKNPKRMLWDYHKPQMKKLVVNPQKAWLYVPEDHV
HHHHHHHHHHHHHHCCCHHHCCEEEEECCHHHHHCCCCCHHHHEEECCCCEEEEECCCCE
VYVQNADQIFKSKMAVRFLSGMGKLQEDFSIRFAASGAVDKEGNYQLTLVPKRPGLGTDQ
EEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCE
LNLTVDKKSYQIIEGSFTDTYGNETRIQFRNIRVNNRLSDSLFNFRVPTGVEVFNMP
EEEEECCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHEEECCCCCEEECCC
>Mature Secondary Structure
MIMNYNENQKRCFCRGRIILSVLVFLGILSWGSGSLQAAEPLSLSALISRMQVAYERTRD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LKASFIQEVSLKSMGRAEREEGILYLKNPKRMLWDYHKPQMKKLVVNPQKAWLYVPEDHV
HHHHHHHHHHHHHHCCCHHHCCEEEEECCHHHHHCCCCCHHHHEEECCCCEEEEECCCCE
VYVQNADQIFKSKMAVRFLSGMGKLQEDFSIRFAASGAVDKEGNYQLTLVPKRPGLGTDQ
EEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCE
LNLTVDKKSYQIIEGSFTDTYGNETRIQFRNIRVNNRLSDSLFNFRVPTGVEVFNMP
EEEEECCCCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHEEECCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA