| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858666
Identifier: 85858666
GI number: 85858666
Start: 841537
End: 842103
Strand: Direct
Name: 85858666
Synonym: SYN_02914
Alternate gene names: NA
Gene position: 841537-842103 (Clockwise)
Preceding gene: 85858664
Following gene: 85858667
Centisome position: 26.47
GC content: 39.15
Gene sequence:
>567_bases ATGAAAAATCAGAAATGGACGCCCGGTCGACTCGAGGGTGATTTGCGTTCAGGAAAGGGGATCGTTATGAAAATAATCAG ACCCATAATTTTATTGTCGTTTCTTCTCGCCCTGGTCGTTTCCTGGGGATGTTCCAATGATGGTAAAGTGGATGATCAGT TACCCAAACCTTCTCCGCCCGCTGCCGCTTCCTCTGACTGGCTGGAATATGGGAGGAGTAATAAAGGGGATGTTTATTCA TACAATAAGACAAGTATAAAACAGAGAACGGCAGATGTGCTTCAGGTATGGGAGAAAAAAATAATTTCAGATAAAAGCAG AGAAGAAGATATTGAATATTACAGGAGCCAGCGACTTTCAACAAAAGGATATGAAAAGCTTTCTTATAAACTTATTTTAC AGGAAATAGACTGTAAGAAAAAAACGTATCGTATTTTATCTATTATTGAACATGATACGGATGATCATGTATTGGATAGT CTTTCCTTTGATAAACCGGACTGGGGTTCTATAACTCCTGGTTCCGTAATCGATGCATTACGGGGAAAGGTCTGTAAAAA ACAATAA
Upstream 100 bases:
>100_bases AAGGCACAGAGCCCATACAGTATTACCCGTAAAAATGATCAGGGTCGAAATCAGAAAAAATATTTGATGTGTTTCTTCTT TTATTCATGAGAAATGTCGA
Downstream 100 bases:
>100_bases CGACGAAGGGAGAGATATGAAAACAGTCAAAATAAAAATTAAACATGGCAACACAGAAGTTGAAATTGAGGGGCCAGAGG ACTTTCTTATTAAATTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKNQKWTPGRLEGDLRSGKGIVMKIIRPIILLSFLLALVVSWGCSNDGKVDDQLPKPSPPAAASSDWLEYGRSNKGDVYS YNKTSIKQRTADVLQVWEKKIISDKSREEDIEYYRSQRLSTKGYEKLSYKLILQEIDCKKKTYRILSIIEHDTDDHVLDS LSFDKPDWGSITPGSVIDALRGKVCKKQ
Sequences:
>Translated_188_residues MKNQKWTPGRLEGDLRSGKGIVMKIIRPIILLSFLLALVVSWGCSNDGKVDDQLPKPSPPAAASSDWLEYGRSNKGDVYS YNKTSIKQRTADVLQVWEKKIISDKSREEDIEYYRSQRLSTKGYEKLSYKLILQEIDCKKKTYRILSIIEHDTDDHVLDS LSFDKPDWGSITPGSVIDALRGKVCKKQ >Mature_188_residues MKNQKWTPGRLEGDLRSGKGIVMKIIRPIILLSFLLALVVSWGCSNDGKVDDQLPKPSPPAAASSDWLEYGRSNKGDVYS YNKTSIKQRTADVLQVWEKKIISDKSREEDIEYYRSQRLSTKGYEKLSYKLILQEIDCKKKTYRILSIIEHDTDDHVLDS LSFDKPDWGSITPGSVIDALRGKVCKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21425; Mature: 21425
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNQKWTPGRLEGDLRSGKGIVMKIIRPIILLSFLLALVVSWGCSNDGKVDDQLPKPSPP CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AAASSDWLEYGRSNKGDVYSYNKTSIKQRTADVLQVWEKKIISDKSREEDIEYYRSQRLS CCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC TKGYEKLSYKLILQEIDCKKKTYRILSIIEHDTDDHVLDSLSFDKPDWGSITPGSVIDAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH RGKVCKKQ HHHHHCCC >Mature Secondary Structure MKNQKWTPGRLEGDLRSGKGIVMKIIRPIILLSFLLALVVSWGCSNDGKVDDQLPKPSPP CCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AAASSDWLEYGRSNKGDVYSYNKTSIKQRTADVLQVWEKKIISDKSREEDIEYYRSQRLS CCCCHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC TKGYEKLSYKLILQEIDCKKKTYRILSIIEHDTDDHVLDSLSFDKPDWGSITPGSVIDAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCHHHHHHH RGKVCKKQ HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA