Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858667

Identifier: 85858667

GI number: 85858667

Start: 842069

End: 842473

Strand: Direct

Name: 85858667

Synonym: SYN_02915

Alternate gene names: NA

Gene position: 842069-842473 (Clockwise)

Preceding gene: 85858666

Following gene: 85858670

Centisome position: 26.49

GC content: 40.0

Gene sequence:

>405_bases
ATGCATTACGGGGAAAGGTCTGTAAAAAACAATAACGACGAAGGGAGAGATATGAAAACAGTCAAAATAAAAATTAAACA
TGGCAACACAGAAGTTGAAATTGAGGGGCCAGAGGACTTTCTTATTAAATTCTTGAACTCCAGGGAATTATTCAAATCCG
AACGGGAAGTCGCCAGACCGCAGAAAACGCGTAAAAAGAAACAGTCAGGCTCCAGGTATGATGATATTCTTCACGTTATA
AGAAGCGGCAATAGTGAGGGCGTATCTCTCAATACGATCGTCGAAAAAACTAAACTCACCAAACAGCAAATCAATCAGGT
CCTGATTAAACTGAAGAAGAACAATGAGGTAAAATCAATCAGCAAAGGGGTCTATGCATTGGTGGGAAGAACAGAAGAGT
CGTAA

Upstream 100 bases:

>100_bases
ATTTTATCTATTATTGAACATGATACGGATGATCATGTATTGGATAGTCTTTCCTTTGATAAACCGGACTGGGGTTCTAT
AACTCCTGGTTCCGTAATCG

Downstream 100 bases:

>100_bases
ACATCCATTCAAGATCCGGCAGCAGACGATCTGGATTCCGTATATAGTGCGATTTCGACGAAATGGAGTGTCAGCGGAGA
AACCGTGATCGTTTAGATGG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MHYGERSVKNNNDEGRDMKTVKIKIKHGNTEVEIEGPEDFLIKFLNSRELFKSEREVARPQKTRKKKQSGSRYDDILHVI
RSGNSEGVSLNTIVEKTKLTKQQINQVLIKLKKNNEVKSISKGVYALVGRTEES

Sequences:

>Translated_134_residues
MHYGERSVKNNNDEGRDMKTVKIKIKHGNTEVEIEGPEDFLIKFLNSRELFKSEREVARPQKTRKKKQSGSRYDDILHVI
RSGNSEGVSLNTIVEKTKLTKQQINQVLIKLKKNNEVKSISKGVYALVGRTEES
>Mature_134_residues
MHYGERSVKNNNDEGRDMKTVKIKIKHGNTEVEIEGPEDFLIKFLNSRELFKSEREVARPQKTRKKKQSGSRYDDILHVI
RSGNSEGVSLNTIVEKTKLTKQQINQVLIKLKKNNEVKSISKGVYALVGRTEES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15385; Mature: 15385

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYGERSVKNNNDEGRDMKTVKIKIKHGNTEVEIEGPEDFLIKFLNSRELFKSEREVARP
CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCC
QKTRKKKQSGSRYDDILHVIRSGNSEGVSLNTIVEKTKLTKQQINQVLIKLKKNNEVKSI
HHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SKGVYALVGRTEES
HHHHHHEECCCCCC
>Mature Secondary Structure
MHYGERSVKNNNDEGRDMKTVKIKIKHGNTEVEIEGPEDFLIKFLNSRELFKSEREVARP
CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHCCHHHHHHHHHHHCC
QKTRKKKQSGSRYDDILHVIRSGNSEGVSLNTIVEKTKLTKQQINQVLIKLKKNNEVKSI
HHHHHHHHCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SKGVYALVGRTEES
HHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA