Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858641

Identifier: 85858641

GI number: 85858641

Start: 812594

End: 812932

Strand: Direct

Name: 85858641

Synonym: SYN_01753

Alternate gene names: NA

Gene position: 812594-812932 (Clockwise)

Preceding gene: 85858637

Following gene: 85858643

Centisome position: 25.56

GC content: 41.59

Gene sequence:

>339_bases
TTGAGCTTCTGTCATCACCATCCGAATTCCTCCATCTCTTCCGATCGGGCAATCATTTCACGCACGATATCCTTCGGATC
GATGCCTTGCTTCCTGCAGTCCGCAAGGTTTTCCATCAGGCCGTTTTCTTCCAGCAATTTCAAAATGATCTCCAGTTCCT
CTTCTTTCATTTTTATACCTCCTTCCGGGCACGTCTTATACTTGAATCAAAATATCGGATTGACTCTCTCTGTCAAGAGG
TTAATTCGGGAAATAGAACTTTTCGTCTGTCCCTTTAAAAATGGGGTGCAGGATAATATTTATTATTTGAATTCTTCTGA
CAACCGAACAGATTATTGA

Upstream 100 bases:

>100_bases
GTTTGACTCCTTCATCGCAGTTATCAGAAATAAAAACGGCCATCCTGATCATTCGTTTCTGCGGATCGGACTCCGCCTTT
GCCTCTGCCAGTCTTTTCTT

Downstream 100 bases:

>100_bases
TAAAAACCGTTACAGCGCTTTCCGGGGAACGGTTCTCGATGAAATGTTAACGTCCTGCGGTTTTGAAGAGATTATCATCA
CGGGAGTCATGACGAACTGC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSFCHHHPNSSISSDRAIISRTISFGSMPCFLQSARFSIRPFSSSNFKMISSSSSFIFIPPSGHVLYLNQNIGLTLSVKR
LIREIELFVCPFKNGVQDNIYYLNSSDNRTDY

Sequences:

>Translated_112_residues
MSFCHHHPNSSISSDRAIISRTISFGSMPCFLQSARFSIRPFSSSNFKMISSSSSFIFIPPSGHVLYLNQNIGLTLSVKR
LIREIELFVCPFKNGVQDNIYYLNSSDNRTDY
>Mature_111_residues
SFCHHHPNSSISSDRAIISRTISFGSMPCFLQSARFSIRPFSSSNFKMISSSSSFIFIPPSGHVLYLNQNIGLTLSVKRL
IREIELFVCPFKNGVQDNIYYLNSSDNRTDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12720; Mature: 12588

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFCHHHPNSSISSDRAIISRTISFGSMPCFLQSARFSIRPFSSSNFKMISSSSSFIFIP
CCCCCCCCCCCCCCCHHEEEEECCCCCCCEEEECCCEEEEECCCCCEEEEECCCCEEEEC
PSGHVLYLNQNIGLTLSVKRLIREIELFVCPFKNGVQDNIYYLNSSDNRTDY
CCCCEEEEECCCCEEEEHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SFCHHHPNSSISSDRAIISRTISFGSMPCFLQSARFSIRPFSSSNFKMISSSSSFIFIP
CCCCCCCCCCCCCCHHEEEEECCCCCCCEEEECCCEEEEECCCCCEEEEECCCCEEEEC
PSGHVLYLNQNIGLTLSVKRLIREIELFVCPFKNGVQDNIYYLNSSDNRTDY
CCCCEEEEECCCCEEEEHHHHHHHHEEEEECCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA