| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858621
Identifier: 85858621
GI number: 85858621
Start: 787686
End: 788255
Strand: Direct
Name: 85858621
Synonym: SYN_00199
Alternate gene names: NA
Gene position: 787686-788255 (Clockwise)
Preceding gene: 85858619
Following gene: 85858624
Centisome position: 24.78
GC content: 53.68
Gene sequence:
>570_bases ATGAGAAATCAAGGAGGCAGTAAAATGAAAAAAACGCTTTTTGGAGTTCTGTTCTGCGCATTGGCGCTGATTGCTCCGAT GTCCGCGATGGCAAGAGTGGATGTTCATGTGAGTATCCCGCTTCCTCCGCCGATCGTTTTTACCGCGCCGCCGGCGGCTG TGGTGATTCCTGAGACCTATATCTACGCCTTTCCTGATGTCCGGGAGGAGATTTTCTTCTGCGACGGCTGGTGGTGGCGT CAGTGGGACGGGCGCTGGTATCGGTCACGGAACCATAACTCCGGCTGGGCTCACTATCATCGGGCTCCCGCCTTTTATTC AAAAGTTCCGGCAGGCTGGAGAAATGACTACAGGAACAACCATTGGAAGGGGCATTATTGGAAACACCAGCGTGTGTCTT CTGATCAGCTTAAAGATAACTGGAAACACTGGGAACGGAATAAGTATTGGGAGAAGCGTCACAACTGGGGTGTGAAGAAA GCACAGGTCCCGCCTCAGCACCGGCGTTCTCAGGAGCTCCGGCACCAGGGAAATCATGGAGGGGGGAACGAGAGGGCTGA TAGGCGGTAA
Upstream 100 bases:
>100_bases TCAGTGTCAGCATTCATTAATAGGGCCTGTTTTTCTGATGAAGGGACAGGGCAGGAAAGCGTAAGGTTCAACTAATCAGA ATCAATGAAGAAAATTAAAA
Downstream 100 bases:
>100_bases TTCATTAAAAAAGTCTCTCCACTTCAACTCACGTGCTGAGAAACCCTGGATGGAATCTGCCGGCGCCCGGATGAGCCGGC GGCGGGGAGACTGGTGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRNQGGSKMKKTLFGVLFCALALIAPMSAMARVDVHVSIPLPPPIVFTAPPAAVVIPETYIYAFPDVREEIFFCDGWWWR QWDGRWYRSRNHNSGWAHYHRAPAFYSKVPAGWRNDYRNNHWKGHYWKHQRVSSDQLKDNWKHWERNKYWEKRHNWGVKK AQVPPQHRRSQELRHQGNHGGGNERADRR
Sequences:
>Translated_189_residues MRNQGGSKMKKTLFGVLFCALALIAPMSAMARVDVHVSIPLPPPIVFTAPPAAVVIPETYIYAFPDVREEIFFCDGWWWR QWDGRWYRSRNHNSGWAHYHRAPAFYSKVPAGWRNDYRNNHWKGHYWKHQRVSSDQLKDNWKHWERNKYWEKRHNWGVKK AQVPPQHRRSQELRHQGNHGGGNERADRR >Mature_189_residues MRNQGGSKMKKTLFGVLFCALALIAPMSAMARVDVHVSIPLPPPIVFTAPPAAVVIPETYIYAFPDVREEIFFCDGWWWR QWDGRWYRSRNHNSGWAHYHRAPAFYSKVPAGWRNDYRNNHWKGHYWKHQRVSSDQLKDNWKHWERNKYWEKRHNWGVKK AQVPPQHRRSQELRHQGNHGGGNERADRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22580; Mature: 22580
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNQGGSKMKKTLFGVLFCALALIAPMSAMARVDVHVSIPLPPPIVFTAPPAAVVIPETY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCCEEEECCCE IYAFPDVREEIFFCDGWWWRQWDGRWYRSRNHNSGWAHYHRAPAFYSKVPAGWRNDYRNN EEECCCCCCCEEEECCCEEECCCCCEECCCCCCCCCCHHHCCCHHHHHCCCCHHHHCCCC HWKGHYWKHQRVSSDQLKDNWKHWERNKYWEKRHNWGVKKAQVPPQHRRSQELRHQGNHG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC GGNERADRR CCCCCCCCC >Mature Secondary Structure MRNQGGSKMKKTLFGVLFCALALIAPMSAMARVDVHVSIPLPPPIVFTAPPAAVVIPETY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEECCCCEEEECCCE IYAFPDVREEIFFCDGWWWRQWDGRWYRSRNHNSGWAHYHRAPAFYSKVPAGWRNDYRNN EEECCCCCCCEEEECCCEEECCCCCEECCCCCCCCCCHHHCCCHHHHHCCCCHHHHCCCC HWKGHYWKHQRVSSDQLKDNWKHWERNKYWEKRHNWGVKKAQVPPQHRRSQELRHQGNHG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC GGNERADRR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA