| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858619
Identifier: 85858619
GI number: 85858619
Start: 787258
End: 787605
Strand: Direct
Name: 85858619
Synonym: SYN_03138
Alternate gene names: NA
Gene position: 787258-787605 (Clockwise)
Preceding gene: 85858617
Following gene: 85858621
Centisome position: 24.76
GC content: 54.6
Gene sequence:
>348_bases ATGGGAAATGCCCTGTGGCAAGTTAAAATCAAAAATTTATTGGAGGTCATGTTTATGAAAAAAACAGCAGCGATGTTGAT CACGATATTTCTCGTGGCGGGATTGACGACTGCCGCTTCCGCATGCGGTCCGGGTAAACAGGGACGTGGATGTCACGACT TTCGCCGGGCATATGTGCGCGGCTGGCATGACGGTCACCATGGGTATGATCGCTGGCGGCACGTTCATGCGCGGCGTCAT GTTCAACCCGCGCCTTATCCCGGCGCCGGGGCTGTGGTCGCTCTTCCCGCTGTTCCGGTGGCGGGTGTCAGCGTTTTCTT TCCTGGTATCAGTGTCAGCATTCATTAA
Upstream 100 bases:
>100_bases TTTTTCATCACGAACCGGGATAACAGGAATTTCAATACACTTGACCTTTCGAAATTGTGAATGAATTCCTGCTGTTTGGA TTGACTGAAGATATTCTGGC
Downstream 100 bases:
>100_bases TAGGGCCTGTTTTTCTGATGAAGGGACAGGGCAGGAAAGCGTAAGGTTCAACTAATCAGAATCAATGAAGAAAATTAAAA ATGAGAAATCAAGGAGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MGNALWQVKIKNLLEVMFMKKTAAMLITIFLVAGLTTAASACGPGKQGRGCHDFRRAYVRGWHDGHHGYDRWRHVHARRH VQPAPYPGAGAVVALPAVPVAGVSVFFPGISVSIH
Sequences:
>Translated_115_residues MGNALWQVKIKNLLEVMFMKKTAAMLITIFLVAGLTTAASACGPGKQGRGCHDFRRAYVRGWHDGHHGYDRWRHVHARRH VQPAPYPGAGAVVALPAVPVAGVSVFFPGISVSIH >Mature_114_residues GNALWQVKIKNLLEVMFMKKTAAMLITIFLVAGLTTAASACGPGKQGRGCHDFRRAYVRGWHDGHHGYDRWRHVHARRHV QPAPYPGAGAVVALPAVPVAGVSVFFPGISVSIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12495; Mature: 12364
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNALWQVKIKNLLEVMFMKKTAAMLITIFLVAGLTTAASACGPGKQGRGCHDFRRAYVR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC GWHDGHHGYDRWRHVHARRHVQPAPYPGAGAVVALPAVPVAGVSVFFPGISVSIH CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEEEEC >Mature Secondary Structure GNALWQVKIKNLLEVMFMKKTAAMLITIFLVAGLTTAASACGPGKQGRGCHDFRRAYVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHC GWHDGHHGYDRWRHVHARRHVQPAPYPGAGAVVALPAVPVAGVSVFFPGISVSIH CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA