| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858558
Identifier: 85858558
GI number: 85858558
Start: 717471
End: 718373
Strand: Direct
Name: 85858558
Synonym: SYN_02451
Alternate gene names: NA
Gene position: 717471-718373 (Clockwise)
Preceding gene: 85858551
Following gene: 85858559
Centisome position: 22.57
GC content: 50.94
Gene sequence:
>903_bases TTGAAGAGCATACTCTTAGCATCTTTATGCTTGACCTGCAAATTCATTCCTCATATAGTCCCCTTCATTATGCAAACCGA AAAAGCAAAATCCGATTGTTCTTTCATACATCTGTGTCAACCGGATCTCTGCAAATCCTGCGGCGCCTGCTGCGGACTGT ACAATTATGCCGACAGCGGCCGGGAAGCGCTGGTCCGCCGGTTGCGATGGAGGACGGCGCTTTTTCATGAAATCGTGAAA GATTCCGAAAATCTGGAACATTTCTCAAATCTGATTCGGGGGACTGAGGATCAGACGCGGCGCTATGAGGTCATCTATTG CTGCGAATACCTTGGATTTCTCGATCCCGCGGAAAAGCGGGTCGGGTGTCTGCTTCATCCCCTGCAGAATCAGGGCAGGG ACCTTCGGGGCGTTTCCTTCTATGGTCAGGAACTCTGCGACGGGCATTTCTGTCCAAGCTATCATTATCTGTCGAGTGAA GAAAAGCGGACGCTGATCGCCGTCATCGACGACTGGTATCTCTACGGTCTTTGTGTGACGGATATCGATCTGGTGAAAGC TTATTTCCGTCTGGTCAGCGACGGCCTCTTTGCGACGCCCCGTCCGGAAAAAATCAAGATGGAGCCCATGCGGAGTCTGG TCCTGAAATTTTTTGAACTGAAACTGGTCTGGCCTTACCGGGATCCGGCGGTGAACCGCCTGGGGAAATATTATTTTGAC GGAGCCCAGTACATGATCGATCGTATCGATTACGAAGCCCTGGGGTGTGAAAAATCGCGCTTTGATCCGATTTTTCTCAG CCTCTCTTCCCGCTTTAAAAGCCGGGAAGAGCTTCTGGCCGCCGAAAAGATCATCCAGGGACATGTCGATGCGTTTATCG AGGCCTATTCTTCCTGTTCCTGA
Upstream 100 bases:
>100_bases ATCACCCGCGAGGCGTCCCAGATATTTATTGTCAGCCCGTTAGGGAGCGCAATTTCTTCGATCAGTCGTTTCATGTTTCT TTCTGTCCTTTATCCTTAAT
Downstream 100 bases:
>100_bases GATTAATCTCGTCATGGCTGACTGGGGATCCTGCTGGAAGGGATTACTTCTCTGGTTTACAGATCCGATTCTTTGAGGGT TTTAAAACGTTATGGAAAGC
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MKSILLASLCLTCKFIPHIVPFIMQTEKAKSDCSFIHLCQPDLCKSCGACCGLYNYADSGREALVRRLRWRTALFHEIVK DSENLEHFSNLIRGTEDQTRRYEVIYCCEYLGFLDPAEKRVGCLLHPLQNQGRDLRGVSFYGQELCDGHFCPSYHYLSSE EKRTLIAVIDDWYLYGLCVTDIDLVKAYFRLVSDGLFATPRPEKIKMEPMRSLVLKFFELKLVWPYRDPAVNRLGKYYFD GAQYMIDRIDYEALGCEKSRFDPIFLSLSSRFKSREELLAAEKIIQGHVDAFIEAYSSCS
Sequences:
>Translated_300_residues MKSILLASLCLTCKFIPHIVPFIMQTEKAKSDCSFIHLCQPDLCKSCGACCGLYNYADSGREALVRRLRWRTALFHEIVK DSENLEHFSNLIRGTEDQTRRYEVIYCCEYLGFLDPAEKRVGCLLHPLQNQGRDLRGVSFYGQELCDGHFCPSYHYLSSE EKRTLIAVIDDWYLYGLCVTDIDLVKAYFRLVSDGLFATPRPEKIKMEPMRSLVLKFFELKLVWPYRDPAVNRLGKYYFD GAQYMIDRIDYEALGCEKSRFDPIFLSLSSRFKSREELLAAEKIIQGHVDAFIEAYSSCS >Mature_300_residues MKSILLASLCLTCKFIPHIVPFIMQTEKAKSDCSFIHLCQPDLCKSCGACCGLYNYADSGREALVRRLRWRTALFHEIVK DSENLEHFSNLIRGTEDQTRRYEVIYCCEYLGFLDPAEKRVGCLLHPLQNQGRDLRGVSFYGQELCDGHFCPSYHYLSSE EKRTLIAVIDDWYLYGLCVTDIDLVKAYFRLVSDGLFATPRPEKIKMEPMRSLVLKFFELKLVWPYRDPAVNRLGKYYFD GAQYMIDRIDYEALGCEKSRFDPIFLSLSSRFKSREELLAAEKIIQGHVDAFIEAYSSCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34718; Mature: 34718
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSILLASLCLTCKFIPHIVPFIMQTEKAKSDCSFIHLCQPDLCKSCGACCGLYNYADSG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCH REALVRRLRWRTALFHEIVKDSENLEHFSNLIRGTEDQTRRYEVIYCCEYLGFLDPAEKR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH VGCLLHPLQNQGRDLRGVSFYGQELCDGHFCPSYHYLSSEEKRTLIAVIDDWYLYGLCVT HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHH DIDLVKAYFRLVSDGLFATPRPEKIKMEPMRSLVLKFFELKLVWPYRDPAVNRLGKYYFD HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH GAQYMIDRIDYEALGCEKSRFDPIFLSLSSRFKSREELLAAEKIIQGHVDAFIEAYSSCS HHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKSILLASLCLTCKFIPHIVPFIMQTEKAKSDCSFIHLCQPDLCKSCGACCGLYNYADSG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCH REALVRRLRWRTALFHEIVKDSENLEHFSNLIRGTEDQTRRYEVIYCCEYLGFLDPAEKR HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHH VGCLLHPLQNQGRDLRGVSFYGQELCDGHFCPSYHYLSSEEKRTLIAVIDDWYLYGLCVT HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHH DIDLVKAYFRLVSDGLFATPRPEKIKMEPMRSLVLKFFELKLVWPYRDPAVNRLGKYYFD HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH GAQYMIDRIDYEALGCEKSRFDPIFLSLSSRFKSREELLAAEKIIQGHVDAFIEAYSSCS HHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA