Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858543

Identifier: 85858543

GI number: 85858543

Start: 704472

End: 705128

Strand: Direct

Name: 85858543

Synonym: SYN_03130

Alternate gene names: NA

Gene position: 704472-705128 (Clockwise)

Preceding gene: 85858542

Following gene: 85858545

Centisome position: 22.16

GC content: 52.51

Gene sequence:

>657_bases
ATGTCGCAGGAACATACTTTTGCTTCTCCCGGACCTGCCGGGTTGGCTGCATTAGCTGTCGCGTGCTTTGGTTTTGGTGC
CGTTTTCTTAGGACTGGTAAAGCCGGGCGGGTATCCGATCCTTGCTGCCTGGCTTGTCGGTGGCGGTATTGTGCAGATTG
TAGTTGCCATCATGGAATTGAAAGATAAAAATTTGACCGGCGGCAACGTCTTTTTGTTTTTTTGTGCCTTCTTCATGTTC
GCTGCAGCATTAAGTTTGATGTCCAAGTTCCTTTTGCTGGTCGGAGCGGGTGCTTTTATTCCGAAAGAGGCAGCAGCGGC
TTCGGCAGCAGCGGCGATCACCTGGTTCCCGAAACCCGATCCCTATGTGGAGGGATGGTGCTGGATGGCAGGCGCCGCGT
TCCTGACAGCGGTAACCCCGGCCTATGCCAAATCAACTTCCCTGCTTTTTTTGCTGGTTATCCTGGTTGACATCTGCCTC
TGGCTTATTGTCGGCATGGACACGGGATGGTATGCCGATCCGGCAACCTGGAAGCCGATGGTCGGGTATATGCTGATTTT
CTGCGGATGGATCGGAATTTACCTGGCGGGGGCAACGGTTTGCAATACCGCATACGGCAAGTCGATTTATTATGTACCCA
AACCCTTGGTGAAGTAA

Upstream 100 bases:

>100_bases
AGAGAAAACCGGGAAACTCTATGATGAATGGCCGATTATGGGGATCTTTACTGAAGTCTTTGATAAGCTTTGAAAGGAAC
AAAAAAAGGAGGAATACTTT

Downstream 100 bases:

>100_bases
TTATTCGCAAGCAAGATAGATAAGGCAACATGCAGGGGCAGGTTATCATACAATATGACCTGCCCCTTCTTTATTGTTGT
TTCCTCGGTCAGACCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMELKDKNLTGGNVFLFFCAFFMF
AAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPDPYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICL
WLIVGMDTGWYADPATWKPMVGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK

Sequences:

>Translated_218_residues
MSQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMELKDKNLTGGNVFLFFCAFFMF
AAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPDPYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICL
WLIVGMDTGWYADPATWKPMVGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK
>Mature_217_residues
SQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMELKDKNLTGGNVFLFFCAFFMFA
AALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPDPYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICLW
LIVGMDTGWYADPATWKPMVGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23092; Mature: 22961

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH
KDKNLTGGNVFLFFCAFFMFAAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCC
PYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICLWLIVGMDTGWYADPATWKPM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC
>Mature Secondary Structure 
SQEHTFASPGPAGLAALAVACFGFGAVFLGLVKPGGYPILAAWLVGGGIVQIVVAIMEL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHH
KDKNLTGGNVFLFFCAFFMFAAALSLMSKFLLLVGAGAFIPKEAAAASAAAAITWFPKPD
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEEECCCCC
PYVEGWCWMAGAAFLTAVTPAYAKSTSLLFLLVILVDICLWLIVGMDTGWYADPATWKPM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VGYMLIFCGWIGIYLAGATVCNTAYGKSIYYVPKPLVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA