| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is spoVE [H]
Identifier: 85858525
GI number: 85858525
Start: 678215
End: 679387
Strand: Direct
Name: spoVE [H]
Synonym: SYN_01745
Alternate gene names: 85858525
Gene position: 678215-679387 (Clockwise)
Preceding gene: 85858524
Following gene: 85858526
Centisome position: 21.33
GC content: 52.43
Gene sequence:
>1173_bases ATGATCGGCTTTCTGAAAAGATTTTCGCTGCCGGAACTGCCATTTCGCAATCTCCCGGAGGGCGATAAACGACCGGATCT TGTTCTCCTGCTCGTGGTCCTGATTCTGGTGAGCATCGGAACCGTCATGATCTACAGTTCAAGCTCCATCATGGCAGCGG CCAGTAAAGCCAGTCATCATGATGGCTGGTATTTTCTCAAAAAGCAGATCGTTTTTGTCATTCTGGGATTCGGGATGATG ATCCTGATGTCCCGGATTCCTTATTCCTATCTGAGGCAGGTAGCCTATCCAAGCATTCTGGTCTGTATCGTCCTTCTTTC ACTTGTTCTTGTTCCTCATTTGGGGGTTCGTGCCGGAGGGGCAACGAGGTGGCTCCGGATGGGTTTTTTTTCATTCCAGG TTTCAGAGCTGGCGAAAATCTGTATGATTCTCTTTATGGCTCAGTTCATGACCCGCAAGATCGAATACCGGAAGAATTTT CAGCGCGGGGTGGCCGTGCCGCTGGCTGTAACGGGGGTCGTTCTCTCTCTGATCATTCTGGAACCGGACTTCGGCACCTG CGCCATTATTTCGGTCATCATGCTGTTGATGCTCTATATGGCCGGCGCAAGGGTGGTTCATCTGGGCGCTTTAATGGCGG CACTCATCCCCGTAGGGATCTGGTTCCTGATCCATGAAAGGTACCGCGTGGACAGGTTGACAGCCTTTCTCGATCCATGG AAGGATCCCCAGAAGACCGGGTTTCAGATTATCCAGTCACTCATTTCCTTCGGTTCCGGCGGAGCTTTCGGCGTCGGCGT CGGTGACAGTATGCAGAAGCTCTTCTATCTGCCTGAACCTCATACAGATTTCATCCTGTCCATTATTGCCGAAGAAGCGG GCTTTGTCGGGGTGGTGGTGGTCATTGCCTTGTTCGTGATTTTGATCGTACGGGGGTTCTTTATCGCTTTCAGGGCTCCG GATCTTTTCGGAACGCTCGTTGCCGCCGGCCTGACCATGATTATCGCCCTCGAAGCCGTCATAAATATCGCAGGGGTGAT GGGGCTGATTCCCCTGAAAGGTCTGGCGCTGCCCTTTCTCAGTTACGGCGGGACGTCGCTGCTGATGAGCCTGACGGCTG TGGGCATCCTTCTGAACATCTCCACTTATACGGAAATAAAGGAAGAGTCCTGA
Upstream 100 bases:
>100_bases GGGATGTCGTCCTGTTGTCTCCCGGGTGTGCCAGTTTTGATGAGTTTGCAGATTATAAGGCAAGAGGGAGATTCTTTAAG GAAGAAGTGAGGGCTTTTGC
Downstream 100 bases:
>100_bases TGACTGTTCGAGTGATCATTGCCGGTGGAGGGACCGGCGGGCATCTGTTTCCCGGTGTGGCAATTGCCGAGGAGTTGCTA CGACGAGACAGGGAGAACAG
Product: cell division protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHHDGWYFLKKQIVFVILGFGMM ILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGGATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNF QRGVAVPLAVTGVVLSLIILEPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVVVIALFVILIVRGFFIAFRAP DLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFLSYGGTSLLMSLTAVGILLNISTYTEIKEES
Sequences:
>Translated_390_residues MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHHDGWYFLKKQIVFVILGFGMM ILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGGATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNF QRGVAVPLAVTGVVLSLIILEPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVVVIALFVILIVRGFFIAFRAP DLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFLSYGGTSLLMSLTAVGILLNISTYTEIKEES >Mature_390_residues MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHHDGWYFLKKQIVFVILGFGMM ILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGGATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNF QRGVAVPLAVTGVVLSLIILEPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVVVIALFVILIVRGFFIAFRAP DLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFLSYGGTSLLMSLTAVGILLNISTYTEIKEES
Specific function: May play an essential role not only during sporulation, but also during vegetative growth [H]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=373, Percent_Identity=36.4611260053619, Blast_Score=230, Evalue=1e-61, Organism=Escherichia coli, GI1786853, Length=329, Percent_Identity=35.8662613981763, Blast_Score=176, Evalue=2e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 - InterPro: IPR013437 - InterPro: IPR013438 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 42791; Mature: 42791
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: PS00428 FTSW_RODA_SPOVE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHH CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCC DGWYFLKKQIVFVILGFGMMILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGG CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNFQRGVAVPLAVTGVVLSLIIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC EPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVV CCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHH VIALFVILIVRGFFIAFRAPDLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYGGTSLLMSLTAVGILLNISTYTEIKEES HCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHH CCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCC DGWYFLKKQIVFVILGFGMMILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGG CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNFQRGVAVPLAVTGVVLSLIIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC EPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVV CCHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHEECCCCCHHHHHHHHHHHCCHHHHHH VIALFVILIVRGFFIAFRAPDLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFL HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SYGGTSLLMSLTAVGILLNISTYTEIKEES HCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2115675; 3098901; 9384377; 8436954; 1391053 [H]