Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is spoVE [H]

Identifier: 85858525

GI number: 85858525

Start: 678215

End: 679387

Strand: Direct

Name: spoVE [H]

Synonym: SYN_01745

Alternate gene names: 85858525

Gene position: 678215-679387 (Clockwise)

Preceding gene: 85858524

Following gene: 85858526

Centisome position: 21.33

GC content: 52.43

Gene sequence:

>1173_bases
ATGATCGGCTTTCTGAAAAGATTTTCGCTGCCGGAACTGCCATTTCGCAATCTCCCGGAGGGCGATAAACGACCGGATCT
TGTTCTCCTGCTCGTGGTCCTGATTCTGGTGAGCATCGGAACCGTCATGATCTACAGTTCAAGCTCCATCATGGCAGCGG
CCAGTAAAGCCAGTCATCATGATGGCTGGTATTTTCTCAAAAAGCAGATCGTTTTTGTCATTCTGGGATTCGGGATGATG
ATCCTGATGTCCCGGATTCCTTATTCCTATCTGAGGCAGGTAGCCTATCCAAGCATTCTGGTCTGTATCGTCCTTCTTTC
ACTTGTTCTTGTTCCTCATTTGGGGGTTCGTGCCGGAGGGGCAACGAGGTGGCTCCGGATGGGTTTTTTTTCATTCCAGG
TTTCAGAGCTGGCGAAAATCTGTATGATTCTCTTTATGGCTCAGTTCATGACCCGCAAGATCGAATACCGGAAGAATTTT
CAGCGCGGGGTGGCCGTGCCGCTGGCTGTAACGGGGGTCGTTCTCTCTCTGATCATTCTGGAACCGGACTTCGGCACCTG
CGCCATTATTTCGGTCATCATGCTGTTGATGCTCTATATGGCCGGCGCAAGGGTGGTTCATCTGGGCGCTTTAATGGCGG
CACTCATCCCCGTAGGGATCTGGTTCCTGATCCATGAAAGGTACCGCGTGGACAGGTTGACAGCCTTTCTCGATCCATGG
AAGGATCCCCAGAAGACCGGGTTTCAGATTATCCAGTCACTCATTTCCTTCGGTTCCGGCGGAGCTTTCGGCGTCGGCGT
CGGTGACAGTATGCAGAAGCTCTTCTATCTGCCTGAACCTCATACAGATTTCATCCTGTCCATTATTGCCGAAGAAGCGG
GCTTTGTCGGGGTGGTGGTGGTCATTGCCTTGTTCGTGATTTTGATCGTACGGGGGTTCTTTATCGCTTTCAGGGCTCCG
GATCTTTTCGGAACGCTCGTTGCCGCCGGCCTGACCATGATTATCGCCCTCGAAGCCGTCATAAATATCGCAGGGGTGAT
GGGGCTGATTCCCCTGAAAGGTCTGGCGCTGCCCTTTCTCAGTTACGGCGGGACGTCGCTGCTGATGAGCCTGACGGCTG
TGGGCATCCTTCTGAACATCTCCACTTATACGGAAATAAAGGAAGAGTCCTGA

Upstream 100 bases:

>100_bases
GGGATGTCGTCCTGTTGTCTCCCGGGTGTGCCAGTTTTGATGAGTTTGCAGATTATAAGGCAAGAGGGAGATTCTTTAAG
GAAGAAGTGAGGGCTTTTGC

Downstream 100 bases:

>100_bases
TGACTGTTCGAGTGATCATTGCCGGTGGAGGGACCGGCGGGCATCTGTTTCCCGGTGTGGCAATTGCCGAGGAGTTGCTA
CGACGAGACAGGGAGAACAG

Product: cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHHDGWYFLKKQIVFVILGFGMM
ILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGGATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNF
QRGVAVPLAVTGVVLSLIILEPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW
KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVVVIALFVILIVRGFFIAFRAP
DLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFLSYGGTSLLMSLTAVGILLNISTYTEIKEES

Sequences:

>Translated_390_residues
MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHHDGWYFLKKQIVFVILGFGMM
ILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGGATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNF
QRGVAVPLAVTGVVLSLIILEPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW
KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVVVIALFVILIVRGFFIAFRAP
DLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFLSYGGTSLLMSLTAVGILLNISTYTEIKEES
>Mature_390_residues
MIGFLKRFSLPELPFRNLPEGDKRPDLVLLLVVLILVSIGTVMIYSSSSIMAAASKASHHDGWYFLKKQIVFVILGFGMM
ILMSRIPYSYLRQVAYPSILVCIVLLSLVLVPHLGVRAGGATRWLRMGFFSFQVSELAKICMILFMAQFMTRKIEYRKNF
QRGVAVPLAVTGVVLSLIILEPDFGTCAIISVIMLLMLYMAGARVVHLGALMAALIPVGIWFLIHERYRVDRLTAFLDPW
KDPQKTGFQIIQSLISFGSGGAFGVGVGDSMQKLFYLPEPHTDFILSIIAEEAGFVGVVVVIALFVILIVRGFFIAFRAP
DLFGTLVAAGLTMIIALEAVINIAGVMGLIPLKGLALPFLSYGGTSLLMSLTAVGILLNISTYTEIKEES

Specific function: May play an essential role not only during sporulation, but also during vegetative growth [H]

COG id: COG0772

COG function: function code D; Bacterial cell division membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsW/rodA/spoVE family [H]

Homologues:

Organism=Escherichia coli, GI1786277, Length=373, Percent_Identity=36.4611260053619, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1786853, Length=329, Percent_Identity=35.8662613981763, Blast_Score=176, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001182
- InterPro:   IPR018365
- InterPro:   IPR013437
- InterPro:   IPR013438 [H]

Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]

EC number: NA

Molecular weight: Translated: 42791; Mature: 42791

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00428 FTSW_RODA_SPOVE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2115675; 3098901; 9384377; 8436954; 1391053 [H]