Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is yceG [H]

Identifier: 85858515

GI number: 85858515

Start: 667633

End: 668709

Strand: Direct

Name: yceG [H]

Synonym: SYN_01735

Alternate gene names: 85858515

Gene position: 667633-668709 (Clockwise)

Preceding gene: 85858514

Following gene: 85858516

Centisome position: 21.0

GC content: 49.49

Gene sequence:

>1077_bases
ATGCCATATCGCAAGAAAAAATTCCTTCGGATGCCTGCGATGCAAATGAGTCGTGAAATGAGAAAAAAAAGGAAGAAGAA
AAAAAAGCTTTTTACGGGTCTTCTGCTGGCACTGCTTTATCTTCTGGCGGCGTGGTTTCTCTTCTATGTCGACCGGCCCG
TAAATCCGGATCTTCCCGTGACCGCCGTAAGAATTCTGCCGGGGACCGGATTCTTACAGGTCGTGGATAAACTTCAGCAG
GCGGGGCTTGTCCGCAATCCTCCCTTTTTTTACATCCTGATTTTGACAAAGGGCGCCGCAAGAAATTTACGGGCCGGTGA
GTATGAATTTTCCGGCAGGATGACCCCCCTGGAGATGGTAAACAGGCTGTCACAGGGAGATATAAAAATACGCCGGATTA
CGATCCGGGAAGATCTGAATTTAAAGGAAATAGCAGCCCATCTGGCCGCTCTGCATCTGGTGGATGAAAAAAAATTCCTG
GCCCTGACAACGGACCGGACCTTTCTGCGGAGTCTGGGGATTGAAGGGGACACTGCGGAGGGTTACCTTTATCCGGATAC
CTATTTCTTTGACTCGGCCATAAGTCCGGGACAGATTATTCGCCGCATGGTGGAACAATTCTGGAAAGTGGTTACCCCGG
AGATGAGAGAAAAGGTTCAGCAGATGGGCATGACCATGAACGAGTTTGTTACTCTGGCTTCCCTGATCGGCAAGGAGACA
GGCTTCAGTGATGAGAAACCCCTTATCGCAGCGGTTTTTCACAACCGTTTGAAGAAAGGCATGCGCCTTCAAAGTGATCC
CACAGCAGTCTACCATATGGCGCCCTTTGACGGAGAGATCAAACGTCGGCATCTGCTGCTGATGACGCCTTACAATACTT
ATCATATCGAAGGTTTGCCGCCTGGCCCGATCGCCAATCCAGGTAGAGATTCCCTGCTGGCCGCGGTCACTCCGGCCAAA
GTGGATTACCTTTATTTTGTTTCCAATTGCAACGGTTCCCACCAGTTTTCCTCCACATTGAAAGAACACAATCAGGCTGT
TGTAAGATATCGACTTGCAAAGGGAAAAGTCGAGTGA

Upstream 100 bases:

>100_bases
GAGGCGGAAGAGATCCTGTCCCGCTCCGGGGTTCCCCCAAGAAAAAGAAGGGGAGTCGTTGATCGCCTGGCTGCCAGTCT
GATCCTTCAATCCTATCTGG

Downstream 100 bases:

>100_bases
TTTTTTCTTGACAAACCGCAAGCCCCTCTTTATATTCATACCCCGGTGGAGTGAAGTGGCGTGATGTGGAGGAATAGGCG
GGGATGGGCGGTTTCCGGGG

Product: 4-amino-4-deoxychorismate lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MPYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPVTAVRILPGTGFLQVVDKLQQ
AGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMVNRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFL
ALTTDRTFLRSLGIEGDTAEGYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET
GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLPPGPIANPGRDSLLAAVTPAK
VDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE

Sequences:

>Translated_358_residues
MPYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPVTAVRILPGTGFLQVVDKLQQ
AGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMVNRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFL
ALTTDRTFLRSLGIEGDTAEGYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET
GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLPPGPIANPGRDSLLAAVTPAK
VDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE
>Mature_357_residues
PYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPVTAVRILPGTGFLQVVDKLQQA
GLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMVNRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFLA
LTTDRTFLRSLGIEGDTAEGYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKETG
FSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLPPGPIANPGRDSLLAAVTPAKV
DYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE

Specific function: Unknown

COG id: COG1559

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0755 family [H]

Homologues:

Organism=Escherichia coli, GI1787339, Length=291, Percent_Identity=34.3642611683849, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003770 [H]

Pfam domain/function: PF02618 ADC_lyase [H]

EC number: NA

Molecular weight: Translated: 40943; Mature: 40812

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPV
CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
TAVRILPGTGFLQVVDKLQQAGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMV
EEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCHHHHH
NRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFLALTTDRTFLRSLGIEGDTAE
HHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCC
GYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC
GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCC
PGPIANPGRDSLLAAVTPAKVDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE
CCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PYRKKKFLRMPAMQMSREMRKKRKKKKKLFTGLLLALLYLLAAWFLFYVDRPVNPDLPV
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
TAVRILPGTGFLQVVDKLQQAGLVRNPPFFYILILTKGAARNLRAGEYEFSGRMTPLEMV
EEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCHHHHH
NRLSQGDIKIRRITIREDLNLKEIAAHLAALHLVDEKKFLALTTDRTFLRSLGIEGDTAE
HHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCCCCCC
GYLYPDTYFFDSAISPGQIIRRMVEQFWKVVTPEMREKVQQMGMTMNEFVTLASLIGKET
CEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC
GFSDEKPLIAAVFHNRLKKGMRLQSDPTAVYHMAPFDGEIKRRHLLLMTPYNTYHIEGLP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEECCCC
PGPIANPGRDSLLAAVTPAKVDYLYFVSNCNGSHQFSSTLKEHNQAVVRYRLAKGKVE
CCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 1644759; 8631667 [H]