Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85858495

Identifier: 85858495

GI number: 85858495

Start: 651028

End: 651837

Strand: Direct

Name: 85858495

Synonym: SYN_03044

Alternate gene names: NA

Gene position: 651028-651837 (Clockwise)

Preceding gene: 85858494

Following gene: 85858496

Centisome position: 20.48

GC content: 52.47

Gene sequence:

>810_bases
GTGGATATTCGGGTTGACAAGGAGAAGAGCATGAAAAAGCCGGGTGCGGTGATTGCGGGAATAGGCCTGCTGATCTTTTT
TTTGTACCTTACGCCGGCCATTGCGGCAGTGCGGGTCATGACCGTCAAGATGGCCAGGGGGGATGCGAGAGTCGGTGTTC
TTATCGGGAACGCCCAGGTTATTTCTGCAGAAAAAAGTTCAGCACGGTCATTGAACAGAAACGATCGGCTTTACGTGGGT
GATGAGGTTGCAACGGGGTCCGGATCGAGACTGGAATTGCTTCTTCCCGATTCTTCCCGGGTTCGCTTCAGTGGAAATAC
CCGTTTCCGAATACAGGAAATAAAATATGGGGAGCACAACGATTCCAGATGCATCCGTATCAATGTGAGCATGGGTAAGG
CATGGGCAAATGTGAGCAGGGCAGTGGGAAAGCAAGGCATCTTTGAACTGCAAAGTGAAAATGCGATTGCCGGGGTGCGG
GGCACCGTATATCGTATGAATGTGGAGAATGATCAGTCCACACTCGTAAAGGTTTATGAAGGCCAGGTCCATGTTTCCGG
AGGAGGAAAAACCAAAAGTACCACGCCGGCAGTTATGAGTCCTCCGAGTAAGATAGCCGGCCCCCGATCCGTTTCCGGTC
CCCGGAAAGTTGCGATGGAAGAATGGACCGTCATAGTGAGAGCCATGCAGCAGATCAGCATCAATGCAGACGGTACGGCG
GGCATGCCCAGCGATTTCGTCATGGAAGAAGATCGGGACGATTGGGTGGACTGGAACCGGTCGCGGGATGAGATAGATGA
TTCCGAGTGA

Upstream 100 bases:

>100_bases
GAAAAGGGTCTGACCGTGCTCTGAGCCGGTTCAGTGAGACTGGCATTGCGCACCCACATGAATAATTATGTACGTCATGG
AACAGGCTTGCACATTTTGA

Downstream 100 bases:

>100_bases
TGGCTGCGGGAGGACAGAGTGCCAGTTGTTTTTTCGATCGGATGCTGAACACAGAGAAGACCCGCATGCATTGATGGTTC
GCCGATGAATATTCCTAATA

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQVISAEKSSARSLNRNDRLYVG
DEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHNDSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVR
GTVYRMNVENDQSTLVKVYEGQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA
GMPSDFVMEEDRDDWVDWNRSRDEIDDSE

Sequences:

>Translated_269_residues
MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQVISAEKSSARSLNRNDRLYVG
DEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHNDSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVR
GTVYRMNVENDQSTLVKVYEGQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA
GMPSDFVMEEDRDDWVDWNRSRDEIDDSE
>Mature_269_residues
MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQVISAEKSSARSLNRNDRLYVG
DEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHNDSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVR
GTVYRMNVENDQSTLVKVYEGQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA
GMPSDFVMEEDRDDWVDWNRSRDEIDDSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29466; Mature: 29466

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQV
CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCEEE
ISAEKSSARSLNRNDRLYVGDEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHN
EECCCHHHHCCCCCCCEEECCEEECCCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCC
DSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVRGTVYRMNVENDQSTLVKVYE
CCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEEECCCCCCEEEEEEE
GQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA
CEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
GMPSDFVMEEDRDDWVDWNRSRDEIDDSE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQV
CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCEEE
ISAEKSSARSLNRNDRLYVGDEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHN
EECCCHHHHCCCCCCCEEECCEEECCCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCC
DSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVRGTVYRMNVENDQSTLVKVYE
CCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEEECCCCCCEEEEEEE
GQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA
CEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
GMPSDFVMEEDRDDWVDWNRSRDEIDDSE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA