| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858495
Identifier: 85858495
GI number: 85858495
Start: 651028
End: 651837
Strand: Direct
Name: 85858495
Synonym: SYN_03044
Alternate gene names: NA
Gene position: 651028-651837 (Clockwise)
Preceding gene: 85858494
Following gene: 85858496
Centisome position: 20.48
GC content: 52.47
Gene sequence:
>810_bases GTGGATATTCGGGTTGACAAGGAGAAGAGCATGAAAAAGCCGGGTGCGGTGATTGCGGGAATAGGCCTGCTGATCTTTTT TTTGTACCTTACGCCGGCCATTGCGGCAGTGCGGGTCATGACCGTCAAGATGGCCAGGGGGGATGCGAGAGTCGGTGTTC TTATCGGGAACGCCCAGGTTATTTCTGCAGAAAAAAGTTCAGCACGGTCATTGAACAGAAACGATCGGCTTTACGTGGGT GATGAGGTTGCAACGGGGTCCGGATCGAGACTGGAATTGCTTCTTCCCGATTCTTCCCGGGTTCGCTTCAGTGGAAATAC CCGTTTCCGAATACAGGAAATAAAATATGGGGAGCACAACGATTCCAGATGCATCCGTATCAATGTGAGCATGGGTAAGG CATGGGCAAATGTGAGCAGGGCAGTGGGAAAGCAAGGCATCTTTGAACTGCAAAGTGAAAATGCGATTGCCGGGGTGCGG GGCACCGTATATCGTATGAATGTGGAGAATGATCAGTCCACACTCGTAAAGGTTTATGAAGGCCAGGTCCATGTTTCCGG AGGAGGAAAAACCAAAAGTACCACGCCGGCAGTTATGAGTCCTCCGAGTAAGATAGCCGGCCCCCGATCCGTTTCCGGTC CCCGGAAAGTTGCGATGGAAGAATGGACCGTCATAGTGAGAGCCATGCAGCAGATCAGCATCAATGCAGACGGTACGGCG GGCATGCCCAGCGATTTCGTCATGGAAGAAGATCGGGACGATTGGGTGGACTGGAACCGGTCGCGGGATGAGATAGATGA TTCCGAGTGA
Upstream 100 bases:
>100_bases GAAAAGGGTCTGACCGTGCTCTGAGCCGGTTCAGTGAGACTGGCATTGCGCACCCACATGAATAATTATGTACGTCATGG AACAGGCTTGCACATTTTGA
Downstream 100 bases:
>100_bases TGGCTGCGGGAGGACAGAGTGCCAGTTGTTTTTTCGATCGGATGCTGAACACAGAGAAGACCCGCATGCATTGATGGTTC GCCGATGAATATTCCTAATA
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQVISAEKSSARSLNRNDRLYVG DEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHNDSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVR GTVYRMNVENDQSTLVKVYEGQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA GMPSDFVMEEDRDDWVDWNRSRDEIDDSE
Sequences:
>Translated_269_residues MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQVISAEKSSARSLNRNDRLYVG DEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHNDSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVR GTVYRMNVENDQSTLVKVYEGQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA GMPSDFVMEEDRDDWVDWNRSRDEIDDSE >Mature_269_residues MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQVISAEKSSARSLNRNDRLYVG DEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHNDSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVR GTVYRMNVENDQSTLVKVYEGQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA GMPSDFVMEEDRDDWVDWNRSRDEIDDSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29466; Mature: 29466
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQV CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCEEE ISAEKSSARSLNRNDRLYVGDEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHN EECCCHHHHCCCCCCCEEECCEEECCCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCC DSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVRGTVYRMNVENDQSTLVKVYE CCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEEECCCCCCEEEEEEE GQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA CEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC GMPSDFVMEEDRDDWVDWNRSRDEIDDSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDIRVDKEKSMKKPGAVIAGIGLLIFFLYLTPAIAAVRVMTVKMARGDARVGVLIGNAQV CCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECCEEE ISAEKSSARSLNRNDRLYVGDEVATGSGSRLELLLPDSSRVRFSGNTRFRIQEIKYGEHN EECCCHHHHCCCCCCCEEECCEEECCCCCEEEEEECCCCEEEECCCCEEEEEEEECCCCC DSRCIRINVSMGKAWANVSRAVGKQGIFELQSENAIAGVRGTVYRMNVENDQSTLVKVYE CCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCCEEECCCEEEEEECCCCCCEEEEEEE GQVHVSGGGKTKSTTPAVMSPPSKIAGPRSVSGPRKVAMEEWTVIVRAMQQISINADGTA CEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC GMPSDFVMEEDRDDWVDWNRSRDEIDDSE CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA