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The map label for this gene is atpC

Identifier: 85858478

GI number: 85858478

Start: 634636

End: 635043

Strand: Direct

Name: atpC

Synonym: SYN_00543

Alternate gene names: 85858478

Gene position: 634636-635043 (Clockwise)

Preceding gene: 85858477

Following gene: 85858480

Centisome position: 19.96

GC content: 42.65

Gene sequence:

>408_bases
ATGGCTGAAGAACTGATATTAGAAATTGTCACTCCGGAGAAGATGGCTTTCAGTAGTGTGGTTGAGGAAGTGACCATTCC
TGGGAGCGAAGGAGAGTTTGGTGTTTATAAGGGTCATGAATCGTTGCTAAGTTCCGTAGATATCGGTGAGTTAAGCTTTA
CAGTGAAAAATAAGAAGCATTATTATGCGGTTAACACGGGCTTTGCAGAAGTGACGTCAGAGAAAGTAACAGTTCTTGTT
GAGACGGCTGAAGAAGCGGAACTGATCGATAAAGAAAGAGCGATGAGAGCCCAGGCAAGAGCCGAACAGGAGATGGCTAA
ATTATCAAAAGAAGACTTGGAATATGAGAAGCTAAGAGCTTCATTAGCAAGAGCAATTAACAGGATTGGTGTGGCAGGAA
GAATATAG

Upstream 100 bases:

>100_bases
TGACGATTTACCCGAGCAGGCCTTTTATATGGTTGGGGGGATCGAGGAAGCGGTTGAAAAAGCCAAAAAATATCAGGAGC
AATAAGAGCAGGGGAAATCA

Downstream 100 bases:

>100_bases
AGAAATAACAACTTATACAATTGGATAATACCAGGGAGCCGGCATTGGAGTGATCATGACAAATCCAATGCCGGCTTTTT
TATCTTTTTGAGAGAATAAG

Product: ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAEELILEIVTPEKMAFSSVVEEVTIPGSEGEFGVYKGHESLLSSVDIGELSFTVKNKKHYYAVNTGFAEVTSEKVTVLV
ETAEEAELIDKERAMRAQARAEQEMAKLSKEDLEYEKLRASLARAINRIGVAGRI

Sequences:

>Translated_135_residues
MAEELILEIVTPEKMAFSSVVEEVTIPGSEGEFGVYKGHESLLSSVDIGELSFTVKNKKHYYAVNTGFAEVTSEKVTVLV
ETAEEAELIDKERAMRAQARAEQEMAKLSKEDLEYEKLRASLARAINRIGVAGRI
>Mature_134_residues
AEELILEIVTPEKMAFSSVVEEVTIPGSEGEFGVYKGHESLLSSVDIGELSFTVKNKKHYYAVNTGFAEVTSEKVTVLVE
TAEEAELIDKERAMRAQARAEQEMAKLSKEDLEYEKLRASLARAINRIGVAGRI

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=133, Percent_Identity=36.8421052631579, Blast_Score=83, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_SYNAS (Q2LR04)

Other databases:

- EMBL:   CP000252
- RefSeq:   YP_460680.1
- ProteinModelPortal:   Q2LR04
- SMR:   Q2LR04
- STRING:   Q2LR04
- GeneID:   3884825
- GenomeReviews:   CP000252_GR
- KEGG:   sat:SYN_00543
- NMPDR:   fig|56780.10.peg.627
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   DHHAKFI
- PhylomeDB:   Q2LR04
- BioCyc:   SACI56780:SYN_00543-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 14952; Mature: 14821

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEELILEIVTPEKMAFSSVVEEVTIPGSEGEFGVYKGHESLLSSVDIGELSFTVKNKKH
CCCHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHCCCCCEEEEEECCCE
YYAVNTGFAEVTSEKVTVLVETAEEAELIDKERAMRAQARAEQEMAKLSKEDLEYEKLRA
EEEEECCHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLARAINRIGVAGRI
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEELILEIVTPEKMAFSSVVEEVTIPGSEGEFGVYKGHESLLSSVDIGELSFTVKNKKH
CCHHEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHCCCCCEEEEEECCCE
YYAVNTGFAEVTSEKVTVLVETAEEAELIDKERAMRAQARAEQEMAKLSKEDLEYEKLRA
EEEEECCHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLARAINRIGVAGRI
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA