Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

Click here to switch to the map view.

The map label for this gene is 85858461

Identifier: 85858461

GI number: 85858461

Start: 617170

End: 617298

Strand: Direct

Name: 85858461

Synonym: SYN_03401

Alternate gene names: NA

Gene position: 617170-617298 (Clockwise)

Preceding gene: 85858460

Following gene: 85858467

Centisome position: 19.41

GC content: 52.71

Gene sequence:

>129_bases
ATGAAAAGGCGGGCAATGGCAAGGGATATCGGTTTGCAGGCCGGCTTGAAGTTCGTTTATGAGGGCAACGTTCCGGGGGA
AGGGGGGGTGATGAACGTCAAACGGATACGGAGAGATCGTGAAAATTGA

Upstream 100 bases:

>100_bases
TTATTCCTATCCGTAAGTATAAAGAACCTTCCCAACATCGGGCAAGATGGAGGTGTCGAGATGGAAAGTGGTCCGGGAGC
CATGAAAGAAGTTTTACTTT

Downstream 100 bases:

>100_bases
CAAATATCAGTATCTGATTTCGATGGAAAATCAAAAAGCAAAAATATGGGAACGCCGTTCGGCTCTTATCAAAGTTCAGA
AGTTACCTCCTTATGAGGGA

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 42; Mature: 42

Protein sequence:

>42_residues
MKRRAMARDIGLQAGLKFVYEGNVPGEGGVMNVKRIRRDREN

Sequences:

>Translated_42_residues
MKRRAMARDIGLQAGLKFVYEGNVPGEGGVMNVKRIRRDREN
>Mature_42_residues
MKRRAMARDIGLQAGLKFVYEGNVPGEGGVMNVKRIRRDREN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4790; Mature: 4790

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRAMARDIGLQAGLKFVYEGNVPGEGGVMNVKRIRRDREN
CCCCHHHHHCCCCCCEEEEEECCCCCCCCEEHHHHHHCCCCC
>Mature Secondary Structure
MKRRAMARDIGLQAGLKFVYEGNVPGEGGVMNVKRIRRDREN
CCCCHHHHHCCCCCCEEEEEECCCCCCCCEEHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA