| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is mreB [H]
Identifier: 85858467
GI number: 85858467
Start: 623116
End: 624153
Strand: Direct
Name: mreB [H]
Synonym: SYN_00554
Alternate gene names: 85858467
Gene position: 623116-624153 (Clockwise)
Preceding gene: 85858461
Following gene: 85858468
Centisome position: 19.6
GC content: 53.37
Gene sequence:
>1038_bases TTGCTGTTCGATTTCATTTTAGGGAAGTTTTCAAATGATCTGGCCATAGATCTGGGAACAGCCAATACTCTTGTCTATGT CAAGAACAAGGGGATTGTTCTGAGTGAACCTTCCGTTGTAGCGGTTCATAAGGATTCCCGAGGCGTTAAAAAGGTGTTGG CTGTGGGCGCCGAGGCGAAAAAGATGCTTGGAAGAACACCGGGCAATATTGTCGCGATAAGGCCCATGAGAGATGGTGTT ATCGCTGACTTCGATATTACGGAAGCCATGCTGCGGCATTTCATTCTCAGTGTGCACAATCGCCGGGCCCTGGTCAGACC CAGAATCATCGTGTCCATTCCCTCCGGGATCACGCAGGTGGAGAGACGAGCCGTGCGGGAAACCGTGGAGTCGGCAGGCG CCCGTGAAATCTATCTGATCGAGGAGCCCATGGCGGCCGCCATAGGTGCGGGACTGCCCGTATCGGAGCCGATCAGTTCC ATGATTGTTGACATCGGTGGAGGGACAACGGAAGTTGCGGTCATTTCACTGGCCGGCATCGTGTATTCCCAGTCTGTCAG GGTGGCGGGAGACAAGATTGACGCGGAGATCGTCAATTTTATAAAGAGAAAGTACAGTCTTCTCATCGGCGAACGTACGG GAGAGATCATCAAGACGACCATAGGCTGCGCCTATCCGGAAGACGAAATCCGCACTGTCGATGTCAAGGGAAGGGATCTG ATTTCCGGCATTCCCAAGACGGTGGAAATTAATTCCGAGGAAATCCGGGATGCTATTATGGAACCCATCAAGATCATCGT GGATACAATCAAGGATGCTCTGGAAAATGCTCCGCCGGAACTGGCGGGAGATATTGTGGACCGGGGAATCGTATTGACGG GAGGCGGCGCCCTTCTGCGGAAGCTTGATGTCCTGATTCGGGAAGAGACGGGCCTGCCAATCACCATTGCCGACGATCCA CTGACGACGGTAGCCATCGGTGCGGGGATGGCACTCGATCAACTGGACGTATTGAAGGAAGTCGCGATTCAGGCCTGA
Upstream 100 bases:
>100_bases TTGATTAGGGTCATTAAATAGGATATAGGGAACAACCTGCGACTAGGGGCGCAAGTTCCGGCAGTCAGGTATTTCATAAC AAAATCAAGGGGGAAGGACA
Downstream 100 bases:
>100_bases GTCTGAGATGGGCTTCAATCTGAATATCACTGCTTAAATGGGATGTTCTGCTTTCGCTGCGGCCGGGTAGATCCGGATTT CATAATTCGTGTCACGGCAG
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLFDFILGKFSNDLAIDLGTANTLVYVKNKGIVLSEPSVVAVHKDSRGVKKVLAVGAEAKKMLGRTPGNIVAIRPMRDGV IADFDITEAMLRHFILSVHNRRALVRPRIIVSIPSGITQVERRAVRETVESAGAREIYLIEEPMAAAIGAGLPVSEPISS MIVDIGGGTTEVAVISLAGIVYSQSVRVAGDKIDAEIVNFIKRKYSLLIGERTGEIIKTTIGCAYPEDEIRTVDVKGRDL ISGIPKTVEINSEEIRDAIMEPIKIIVDTIKDALENAPPELAGDIVDRGIVLTGGGALLRKLDVLIREETGLPITIADDP LTTVAIGAGMALDQLDVLKEVAIQA
Sequences:
>Translated_345_residues MLFDFILGKFSNDLAIDLGTANTLVYVKNKGIVLSEPSVVAVHKDSRGVKKVLAVGAEAKKMLGRTPGNIVAIRPMRDGV IADFDITEAMLRHFILSVHNRRALVRPRIIVSIPSGITQVERRAVRETVESAGAREIYLIEEPMAAAIGAGLPVSEPISS MIVDIGGGTTEVAVISLAGIVYSQSVRVAGDKIDAEIVNFIKRKYSLLIGERTGEIIKTTIGCAYPEDEIRTVDVKGRDL ISGIPKTVEINSEEIRDAIMEPIKIIVDTIKDALENAPPELAGDIVDRGIVLTGGGALLRKLDVLIREETGLPITIADDP LTTVAIGAGMALDQLDVLKEVAIQA >Mature_345_residues MLFDFILGKFSNDLAIDLGTANTLVYVKNKGIVLSEPSVVAVHKDSRGVKKVLAVGAEAKKMLGRTPGNIVAIRPMRDGV IADFDITEAMLRHFILSVHNRRALVRPRIIVSIPSGITQVERRAVRETVESAGAREIYLIEEPMAAAIGAGLPVSEPISS MIVDIGGGTTEVAVISLAGIVYSQSVRVAGDKIDAEIVNFIKRKYSLLIGERTGEIIKTTIGCAYPEDEIRTVDVKGRDL ISGIPKTVEINSEEIRDAIMEPIKIIVDTIKDALENAPPELAGDIVDRGIVLTGGGALLRKLDVLIREETGLPITIADDP LTTVAIGAGMALDQLDVLKEVAIQA
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=340, Percent_Identity=62.3529411764706, Blast_Score=421, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 36971; Mature: 36971
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFDFILGKFSNDLAIDLGTANTLVYVKNKGIVLSEPSVVAVHKDSRGVKKVLAVGAEAK CCHHHHHHHCCCCEEEEECCCCEEEEEECCCEEEECCCEEEEECCCCHHHHHHHHCHHHH KMLGRTPGNIVAIRPMRDGVIADFDITEAMLRHFILSVHNRRALVRPRIIVSIPSGITQV HHHCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHH ERRAVRETVESAGAREIYLIEEPMAAAIGAGLPVSEPISSMIVDIGGGTTEVAVISLAGI HHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCHHHHEEECCCCCHHHHHHHHHHH VYSQSVRVAGDKIDAEIVNFIKRKYSLLIGERTGEIIKTTIGCAYPEDEIRTVDVKGRDL HHHCCEEECCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCEEEECCCCHH ISGIPKTVEINSEEIRDAIMEPIKIIVDTIKDALENAPPELAGDIVDRGIVLTGGGALLR HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHH KLDVLIREETGLPITIADDPLTTVAIGAGMALDQLDVLKEVAIQA HHHHHHEECCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLFDFILGKFSNDLAIDLGTANTLVYVKNKGIVLSEPSVVAVHKDSRGVKKVLAVGAEAK CCHHHHHHHCCCCEEEEECCCCEEEEEECCCEEEECCCEEEEECCCCHHHHHHHHCHHHH KMLGRTPGNIVAIRPMRDGVIADFDITEAMLRHFILSVHNRRALVRPRIIVSIPSGITQV HHHCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCHHHH ERRAVRETVESAGAREIYLIEEPMAAAIGAGLPVSEPISSMIVDIGGGTTEVAVISLAGI HHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCCCHHHHEEECCCCCHHHHHHHHHHH VYSQSVRVAGDKIDAEIVNFIKRKYSLLIGERTGEIIKTTIGCAYPEDEIRTVDVKGRDL HHHCCEEECCCCHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCCCCCCCCEEEECCCCHH ISGIPKTVEINSEEIRDAIMEPIKIIVDTIKDALENAPPELAGDIVDRGIVLTGGGALLR HHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCHHHHH KLDVLIREETGLPITIADDPLTTVAIGAGMALDQLDVLKEVAIQA HHHHHHEECCCCEEEECCCCCEEEEECCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]