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The map label for this gene is 85858442

Identifier: 85858442

GI number: 85858442

Start: 597295

End: 597690

Strand: Direct

Name: 85858442

Synonym: SYN_02248

Alternate gene names: NA

Gene position: 597295-597690 (Clockwise)

Preceding gene: 85858441

Following gene: 85858443

Centisome position: 18.79

GC content: 40.4

Gene sequence:

>396_bases
ATGAGAACGATGGCGCAGAAACGGGCGGAATATGCACTTGAAAAGGTGCTTGCCGTTGAGAATAAAAGGGACTTTCAATC
ATTTTCTGCTGGTGCTCCGGCTACGATCCTTCAGAACGGGTTCGGACAAACGCTCGCCTTTTGGTTAGCAAAAGGAACAA
AAAACGGGAAAATTGAAATTACGGATAAACATATTGTGTTGTTCGATATGGTGACAGAATGGCTATCCTTCAAGAGAAAA
GACGTTAATAATGAATTCATTAAAGTTGTTAAAGACAGACCTACAATAATAAAGGAATTAACGACCATGGATCAAAGACA
GTATCTATCTGCCCAAAGTGAAACTTTATCCCTGCTCGAATGGATCAAGCGATTTGCCAATGCCGATTTGACATAA

Upstream 100 bases:

>100_bases
GCCATGTCCAGGATATCATCACAAAATTCATTCAGATAGGTGGCGACGAAACGCTGGGTCGTGGCATCTGCAAGCTTAAT
TGGATTTCCGGAGGTGGCAA

Downstream 100 bases:

>100_bases
GGGAGGATTTATTATGGCATTCTACCCTGTTCATAAGGAATTACAGAATATTTCCCAGAGCATGCCGCAAGGAAACTTCG
GCCTCTGGTATAACAAATTC

Product: cytoplasmic protein

Products: NA

Alternate protein names: Cytoplasmic Protein; CRISPR-Associated Cmr5 Family Protein

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MRTMAQKRAEYALEKVLAVENKRDFQSFSAGAPATILQNGFGQTLAFWLAKGTKNGKIEITDKHIVLFDMVTEWLSFKRK
DVNNEFIKVVKDRPTIIKELTTMDQRQYLSAQSETLSLLEWIKRFANADLT

Sequences:

>Translated_131_residues
MRTMAQKRAEYALEKVLAVENKRDFQSFSAGAPATILQNGFGQTLAFWLAKGTKNGKIEITDKHIVLFDMVTEWLSFKRK
DVNNEFIKVVKDRPTIIKELTTMDQRQYLSAQSETLSLLEWIKRFANADLT
>Mature_131_residues
MRTMAQKRAEYALEKVLAVENKRDFQSFSAGAPATILQNGFGQTLAFWLAKGTKNGKIEITDKHIVLFDMVTEWLSFKRK
DVNNEFIKVVKDRPTIIKELTTMDQRQYLSAQSETLSLLEWIKRFANADLT

Specific function: Unknown

COG id: COG3337

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15089; Mature: 15089

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTMAQKRAEYALEKVLAVENKRDFQSFSAGAPATILQNGFGQTLAFWLAKGTKNGKIEI
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEEE
TDKHIVLFDMVTEWLSFKRKDVNNEFIKVVKDRPTIIKELTTMDQRQYLSAQSETLSLLE
ECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIKRFANADLT
HHHHHHCCCCC
>Mature Secondary Structure
MRTMAQKRAEYALEKVLAVENKRDFQSFSAGAPATILQNGFGQTLAFWLAKGTKNGKIEI
CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCCCCEEEE
TDKHIVLFDMVTEWLSFKRKDVNNEFIKVVKDRPTIIKELTTMDQRQYLSAQSETLSLLE
ECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIKRFANADLT
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA