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The map label for this gene is 85858441

Identifier: 85858441

GI number: 85858441

Start: 596348

End: 597298

Strand: Direct

Name: 85858441

Synonym: SYN_02249

Alternate gene names: NA

Gene position: 596348-597298 (Clockwise)

Preceding gene: 85858440

Following gene: 85858442

Centisome position: 18.76

GC content: 44.69

Gene sequence:

>951_bases
TTGACAAAAAAATCAATGAATCATGTATCCAATTATAGGAGAAACGCCATGCTGAAAAGAGGTCTTTTTTCCATCTGTAC
ATTTTATGCCGTATCGCCCATCCATGCCGGCAGCGGGTCATCGTTCGCCGCCGTTGATTTGCCTATCCAGCGTGAACGAC
ACACCAACTGGCCCCATATCCAGGCATCAGGAGTTAAAGGAGCCATGCGGGCGCACTACCGAGATTTCGCTGAAGATAAA
TCGTTGATCAATTTCCTTTTCGGATATGACAAAGACGATGATGATTATCATAAGTCCTATAATTCCAAGCGGCAGGAAAA
CGAACGATTTGAGGTGAAGGACAATTTTCCCGGCGCCATTTCCTTCTCCGACGCCAAATTGTTGGCCTTTCCCGTCCGGT
CAAATATAGCACCTTTTGTCTGGGTCACCTGTCCCGCAGTTTTAAAAAGATTAAGTGACGATCTTTCATTTACAGGATTG
GGATCAATTGATGACATACAGAACATCGATGGTGAAAATGCCCTATGCCTTGCAGGTAACATTTCGGATAAAGTGATTCT
GGAAGACATGTTCGTTAATGTTGTAAACGTAAGCACTTCAAATCCCATCCCCCAAGGTTTCCCTACTTTAGATAGGCTAC
TGCTGGTCTCCAATGAGACATATAAATATGCTGTCGAGTCTTGTACGGAGATTCAAACGCAGATAAAAATTGATTCTGAG
AAAGGAACGGCCCAAGACGGTTCACTACGCTACCAGGAATTACTTCCTGCGGATTCTGTGCTCTACACTGTCGTTTATTA
CAGCCGCGCTGTTTTTGATAATGCGTTACAGGCCGAAACAGTATGTAGCCATGTCCAGGATATCATCACAAAATTCATTC
AGATAGGTGGCGACGAAACGCTGGGTCGTGGCATCTGCAAGCTTAATTGGATTTCCGGAGGTGGCAAATGA

Upstream 100 bases:

>100_bases
CATTGCATTGCCACAGGTCGTATTCGCTATCTTGGAGGTTGGGATCTGCACAAAGGGTTTCACAAACCGATGAGGGGATA
CTTTCCCGCAGGAACCGTAT

Downstream 100 bases:

>100_bases
GAACGATGGCGCAGAAACGGGCGGAATATGCACTTGAAAAGGTGCTTGCCGTTGAGAATAAAAGGGACTTTCAATCATTT
TCTGCTGGTGCTCCGGCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; CRISPR-Associated RAMP Cmr4 Family Protein; Cmr4 Family CRISPR-Associated RAMP Protein; CRISPR-Associated Ramp Protein Cmr4 Family; Crispr-Associated Ramp Protein Cmr4 Family; CRISPR-Associated RAMP Protein; CRISPR-Associated Ramp Protein; Cmr Crispr-Associated Ramp Protein Cmr4 Family

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTKKSMNHVSNYRRNAMLKRGLFSICTFYAVSPIHAGSGSSFAAVDLPIQRERHTNWPHIQASGVKGAMRAHYRDFAEDK
SLINFLFGYDKDDDDYHKSYNSKRQENERFEVKDNFPGAISFSDAKLLAFPVRSNIAPFVWVTCPAVLKRLSDDLSFTGL
GSIDDIQNIDGENALCLAGNISDKVILEDMFVNVVNVSTSNPIPQGFPTLDRLLLVSNETYKYAVESCTEIQTQIKIDSE
KGTAQDGSLRYQELLPADSVLYTVVYYSRAVFDNALQAETVCSHVQDIITKFIQIGGDETLGRGICKLNWISGGGK

Sequences:

>Translated_316_residues
MTKKSMNHVSNYRRNAMLKRGLFSICTFYAVSPIHAGSGSSFAAVDLPIQRERHTNWPHIQASGVKGAMRAHYRDFAEDK
SLINFLFGYDKDDDDYHKSYNSKRQENERFEVKDNFPGAISFSDAKLLAFPVRSNIAPFVWVTCPAVLKRLSDDLSFTGL
GSIDDIQNIDGENALCLAGNISDKVILEDMFVNVVNVSTSNPIPQGFPTLDRLLLVSNETYKYAVESCTEIQTQIKIDSE
KGTAQDGSLRYQELLPADSVLYTVVYYSRAVFDNALQAETVCSHVQDIITKFIQIGGDETLGRGICKLNWISGGGK
>Mature_315_residues
TKKSMNHVSNYRRNAMLKRGLFSICTFYAVSPIHAGSGSSFAAVDLPIQRERHTNWPHIQASGVKGAMRAHYRDFAEDKS
LINFLFGYDKDDDDYHKSYNSKRQENERFEVKDNFPGAISFSDAKLLAFPVRSNIAPFVWVTCPAVLKRLSDDLSFTGLG
SIDDIQNIDGENALCLAGNISDKVILEDMFVNVVNVSTSNPIPQGFPTLDRLLLVSNETYKYAVESCTEIQTQIKIDSEK
GTAQDGSLRYQELLPADSVLYTVVYYSRAVFDNALQAETVCSHVQDIITKFIQIGGDETLGRGICKLNWISGGGK

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35220; Mature: 35089

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKSMNHVSNYRRNAMLKRGLFSICTFYAVSPIHAGSGSSFAAVDLPIQRERHTNWPHI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEECCCCCCCCCCCCCE
QASGVKGAMRAHYRDFAEDKSLINFLFGYDKDDDDYHKSYNSKRQENERFEVKDNFPGAI
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHCCCCEEECCCCCCEE
SFSDAKLLAFPVRSNIAPFVWVTCPAVLKRLSDDLSFTGLGSIDDIQNIDGENALCLAGN
EECCCEEEEEEHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEECC
ISDKVILEDMFVNVVNVSTSNPIPQGFPTLDRLLLVSNETYKYAVESCTEIQTQIKIDSE
CCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHEEEECCCHHHHHHHHHHHHHHEEEEECC
KGTAQDGSLRYQELLPADSVLYTVVYYSRAVFDNALQAETVCSHVQDIITKFIQIGGDET
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LGRGICKLNWISGGGK
HCCCEEEEEEECCCCC
>Mature Secondary Structure 
TKKSMNHVSNYRRNAMLKRGLFSICTFYAVSPIHAGSGSSFAAVDLPIQRERHTNWPHI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCEEEEECCCCCCCCCCCCCE
QASGVKGAMRAHYRDFAEDKSLINFLFGYDKDDDDYHKSYNSKRQENERFEVKDNFPGAI
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHCCCCEEECCCCCCEE
SFSDAKLLAFPVRSNIAPFVWVTCPAVLKRLSDDLSFTGLGSIDDIQNIDGENALCLAGN
EECCCEEEEEEHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCEEEEECC
ISDKVILEDMFVNVVNVSTSNPIPQGFPTLDRLLLVSNETYKYAVESCTEIQTQIKIDSE
CCCHHHHHHHHEEEEEECCCCCCCCCCCHHHHEEEECCCHHHHHHHHHHHHHHEEEEECC
KGTAQDGSLRYQELLPADSVLYTVVYYSRAVFDNALQAETVCSHVQDIITKFIQIGGDET
CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LGRGICKLNWISGGGK
HCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA