| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is 85858422
Identifier: 85858422
GI number: 85858422
Start: 573393
End: 573746
Strand: Direct
Name: 85858422
Synonym: SYN_03386
Alternate gene names: NA
Gene position: 573393-573746 (Clockwise)
Preceding gene: 85858421
Following gene: 85858423
Centisome position: 18.04
GC content: 57.06
Gene sequence:
>354_bases ATGACCATGGGTGAGCGATTTGTCAGCGAGGTCATCTCCCCTGTCGTTTCCACGTGTGACACGTCCCGCATGGCCATCGG GGAGCCCGGACTTCCCCGGGAGTTTCTCTGGCGGGATCGGACCCTCCGGATTGCTGAGGTTCTGCGGACGTGGCGGGAAA CCGGGAAGTGCCGTCATGGCAGCCCCGAACGGTATGTCCGCAAACACTGGTTCGAGGTGATCACGACGGCTAATGACATT ATGAACATCTATTTCGAAAGACAGTCCCATCGTGGAAAGAAGGGGGACCGATGGTGGCTGTTCAGCATCCGGGAAGCAGA GGAAGAGAGGAAGGAGGATTCTTTTCATCCTTGA
Upstream 100 bases:
>100_bases TAAAACCGTGGGCTGGACCAGTCTCTTTCTGTTTTCTCTCTATCTCCTCAACTCACTTGTCCTTTATCTCTATGGAAAAT AAGCATGGCAGGAAAAGGGG
Downstream 100 bases:
>100_bases CAAAAGCAATTTATTTTTAGATAGATTGCGCTTGCCGATAAATAAAACCGCCAGCATCTTTCCTGTTGTGTTGCCTGGTA TTTCAGATCACGGTTTCCCG
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MTMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHGSPERYVRKHWFEVITTANDI MNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP
Sequences:
>Translated_117_residues MTMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHGSPERYVRKHWFEVITTANDI MNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP >Mature_116_residues TMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHGSPERYVRKHWFEVITTANDIM NIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14044; Mature: 13913
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHG CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCC SPERYVRKHWFEVITTANDIMNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCC >Mature Secondary Structure TMGERFVSEVISPVVSTCDTSRMAIGEPGLPREFLWRDRTLRIAEVLRTWRETGKCRHG CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCC SPERYVRKHWFEVITTANDIMNIYFERQSHRGKKGDRWWLFSIREAEEERKEDSFHP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA