| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858127
Identifier: 85858127
GI number: 85858127
Start: 293901
End: 294317
Strand: Direct
Name: 85858127
Synonym: SYN_00076
Alternate gene names: NA
Gene position: 293901-294317 (Clockwise)
Preceding gene: 85858125
Following gene: 85858128
Centisome position: 9.24
GC content: 44.84
Gene sequence:
>417_bases TTGATTATTTATGATCTGAAATGTGAAAATGGGCATAAGTTCGAAGGATGGTTCAGGGACAGAAAGGCCTTTGAAGAACA GAAGGCGCAGAGGTTGATTGCCTGTCCCGTCTGTGGAAGTTCAAACTCGGAGTTATTGCCTTCTTTTCCGAGGATCATGA GCCGGGAGGGAGAAAATGCCTCAGGAAAGGATGCCAGAGAAATCAGTCCCCTGAAACTCCTGCATAAAATTCAGAAATAC GTCAGCAAGAATTTTGAAGACGTCGGTGAGCGGTTTGCGGAAACCGCGCTGAATATCCATCATGGCAAAGAAGATCCGAG AAATATTAAAGGGACTACAACACAGCAGGAGGAGGACGTCTTGAAAGAAGAAGGTATACCGTTTTTTAAAATTCCCCTCC CCAAGTTGGACAGTTAA
Upstream 100 bases:
>100_bases ACTGAATTTTTCCTGGTATCCATCTTGTTCCTGCTCTATTGTTTTTTGCTTTTCAACATGATATTTATTGATGAAATAGA GAAATAAAGGGGGACTATTC
Downstream 100 bases:
>100_bases GGACCGGCAACCTTTTTCGATAATCTAAAATCACACCCGAAAACTTTCAAAAGCCAAAGTCCGTAGAGAATTGTTAGAGA TGTCAGGCAAGCCCGTGCTT
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MIIYDLKCENGHKFEGWFRDRKAFEEQKAQRLIACPVCGSSNSELLPSFPRIMSREGENASGKDAREISPLKLLHKIQKY VSKNFEDVGERFAETALNIHHGKEDPRNIKGTTTQQEEDVLKEEGIPFFKIPLPKLDS
Sequences:
>Translated_138_residues MIIYDLKCENGHKFEGWFRDRKAFEEQKAQRLIACPVCGSSNSELLPSFPRIMSREGENASGKDAREISPLKLLHKIQKY VSKNFEDVGERFAETALNIHHGKEDPRNIKGTTTQQEEDVLKEEGIPFFKIPLPKLDS >Mature_138_residues MIIYDLKCENGHKFEGWFRDRKAFEEQKAQRLIACPVCGSSNSELLPSFPRIMSREGENASGKDAREISPLKLLHKIQKY VSKNFEDVGERFAETALNIHHGKEDPRNIKGTTTQQEEDVLKEEGIPFFKIPLPKLDS
Specific function: Unknown
COG id: COG5319
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15818; Mature: 15818
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYDLKCENGHKFEGWFRDRKAFEEQKAQRLIACPVCGSSNSELLPSFPRIMSREGENA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHCCCCCC SGKDAREISPLKLLHKIQKYVSKNFEDVGERFAETALNIHHGKEDPRNIKGTTTQQEEDV CCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LKEEGIPFFKIPLPKLDS HHHCCCCEEEECCCCCCC >Mature Secondary Structure MIIYDLKCENGHKFEGWFRDRKAFEEQKAQRLIACPVCGSSNSELLPSFPRIMSREGENA CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHCCCCCC SGKDAREISPLKLLHKIQKYVSKNFEDVGERFAETALNIHHGKEDPRNIKGTTTQQEEDV CCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LKEEGIPFFKIPLPKLDS HHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA