| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is lgt [H]
Identifier: 85858089
GI number: 85858089
Start: 259618
End: 260478
Strand: Direct
Name: lgt [H]
Synonym: SYN_01440
Alternate gene names: 85858089
Gene position: 259618-260478 (Clockwise)
Preceding gene: 85858088
Following gene: 85858090
Centisome position: 8.17
GC content: 54.47
Gene sequence:
>861_bases ATGGATGCGTTTTTCCTCTTCTGGCAGCACCTTCCGGAAACCCTCCGGCCGGAACTCTTTTCCATCGGCTCCTTCCAGGT CCGCTATTACAGCCTGATGTACCTGGCGGCCTTCTGTCTGACCTATGTTCTTGTCATGCACCGGGTAAAAAAGGAAGGCA ATTCCTTTTCCGGAGAAACGATACAGGATCTTCTGCTCTGGGCCATTCTCGGTTTGGTTGTCGGGGCGCGGCTGGGGTAT GTCTTTTTCTATAATTTCAGCTATTATCTGAGCCATCCCCTGGAAATTCTGCTGCCCTTTGAATTTTCCGGCGGCATCCG GTTTGTGGGCATCAGCGGGATGTCTTATCATGGCGGGGCCATTGGCGCGCTTCTGGCCACGTTTCTCTTCTGCCGGAAGC GGGGCATTTCCTTCTGGACCATTCTTGAACTCTTTTCGCCCGCCGTGCCCCTGGGCTATACGTTCGGCCGGATCGGCAAC TTCATCAACGGAGAGCTCTACGGACGGGTGACAACAGTTCCCTGGGGCATGTATTTTCCCCTGGATCCCCTGCATGAGCT TCGTCATCCTTCTCAGCTTTACGAGGCCTTTTTTGAAGGCATCGTTCTTTTTGCGATTCTCTGGGGCATCCGCAGACGGA GTCCCTTTGACGGTTTTCTCTTCGCTTCCTATCTCTTCGGCTACGGTCTGGTCCGATTTTTCATCGAATTTTTCCGGGAG CCGGACGCGCAGTTGGGGCTGATGTGGGGAGGAGTCTTCAGCATGGGGCAGGCTCTCTGCCTTCTCATGATGGCAGCCGG CGTTCTGGTGTATATTCTTCGCAGGCCGCAGAAGAGCGGATCGCAGGTTGATCCTGTTTAG
Upstream 100 bases:
>100_bases TCGTTACCGCCTGCGGCGATGCCGCCACGGCGGCCTTTTCGGCTCAACTCCATGTGGAAGCCCTGAAGGGAGAGGATTAC GGAGGAAGAAAGGCCTGAAC
Downstream 100 bases:
>100_bases AAGTACATGGACATTGCCCGGTGGAAATCGGGCGATGAACAGGCCTTTGTTTTCCCCCAGTCGTGCGGAAGACGGAAAGG ATGGGTGAAGTACATGAAAA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MDAFFLFWQHLPETLRPELFSIGSFQVRYYSLMYLAAFCLTYVLVMHRVKKEGNSFSGETIQDLLLWAILGLVVGARLGY VFFYNFSYYLSHPLEILLPFEFSGGIRFVGISGMSYHGGAIGALLATFLFCRKRGISFWTILELFSPAVPLGYTFGRIGN FINGELYGRVTTVPWGMYFPLDPLHELRHPSQLYEAFFEGIVLFAILWGIRRRSPFDGFLFASYLFGYGLVRFFIEFFRE PDAQLGLMWGGVFSMGQALCLLMMAAGVLVYILRRPQKSGSQVDPV
Sequences:
>Translated_286_residues MDAFFLFWQHLPETLRPELFSIGSFQVRYYSLMYLAAFCLTYVLVMHRVKKEGNSFSGETIQDLLLWAILGLVVGARLGY VFFYNFSYYLSHPLEILLPFEFSGGIRFVGISGMSYHGGAIGALLATFLFCRKRGISFWTILELFSPAVPLGYTFGRIGN FINGELYGRVTTVPWGMYFPLDPLHELRHPSQLYEAFFEGIVLFAILWGIRRRSPFDGFLFASYLFGYGLVRFFIEFFRE PDAQLGLMWGGVFSMGQALCLLMMAAGVLVYILRRPQKSGSQVDPV >Mature_286_residues MDAFFLFWQHLPETLRPELFSIGSFQVRYYSLMYLAAFCLTYVLVMHRVKKEGNSFSGETIQDLLLWAILGLVVGARLGY VFFYNFSYYLSHPLEILLPFEFSGGIRFVGISGMSYHGGAIGALLATFLFCRKRGISFWTILELFSPAVPLGYTFGRIGN FINGELYGRVTTVPWGMYFPLDPLHELRHPSQLYEAFFEGIVLFAILWGIRRRSPFDGFLFASYLFGYGLVRFFIEFFRE PDAQLGLMWGGVFSMGQALCLLMMAAGVLVYILRRPQKSGSQVDPV
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=296, Percent_Identity=36.4864864864865, Blast_Score=177, Evalue=9e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 32664; Mature: 32664
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAFFLFWQHLPETLRPELFSIGSFQVRYYSLMYLAAFCLTYVLVMHRVKKEGNSFSGET CCHHHHHHHHCCHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH IQDLLLWAILGLVVGARLGYVFFYNFSYYLSHPLEILLPFEFSGGIRFVGISGMSYHGGA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHH IGALLATFLFCRKRGISFWTILELFSPAVPLGYTFGRIGNFINGELYGRVTTVPWGMYFP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCC LDPLHELRHPSQLYEAFFEGIVLFAILWGIRRRSPFDGFLFASYLFGYGLVRFFIEFFRE CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PDAQLGLMWGGVFSMGQALCLLMMAAGVLVYILRRPQKSGSQVDPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDAFFLFWQHLPETLRPELFSIGSFQVRYYSLMYLAAFCLTYVLVMHRVKKEGNSFSGET CCHHHHHHHHCCHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH IQDLLLWAILGLVVGARLGYVFFYNFSYYLSHPLEILLPFEFSGGIRFVGISGMSYHGGA HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCHH IGALLATFLFCRKRGISFWTILELFSPAVPLGYTFGRIGNFINGELYGRVTTVPWGMYFP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCCCCC LDPLHELRHPSQLYEAFFEGIVLFAILWGIRRRSPFDGFLFASYLFGYGLVRFFIEFFRE CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PDAQLGLMWGGVFSMGQALCLLMMAAGVLVYILRRPQKSGSQVDPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12093901 [H]