Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857981

Identifier: 85857981

GI number: 85857981

Start: 140739

End: 141209

Strand: Direct

Name: 85857981

Synonym: SYN_00624

Alternate gene names: NA

Gene position: 140739-141209 (Clockwise)

Preceding gene: 85857980

Following gene: 85857985

Centisome position: 4.43

GC content: 53.08

Gene sequence:

>471_bases
TTGATAGAGATTGATATCCCTGGAAAGGGCGTTTACAGGTTCGAACATCTGGTCCTGGACCTTAACGGAACGATTTCCCT
GGACGGCGCTGTCATTGAAGGAGTTCCCAAAAGACTTGAATCGCTGCGCCGACTGGTCGACATCGTCATCATCACGGCGG
ATACCCAGGGTAAAGCTAAGGAATTGGGCCAGGATCTTCGCGTTGAAATCCACATTCTCCATCCGGGCGATGAACAGGAG
CAGAAGCTCAGACTGGTGCGGCAGTTGGGCAGGGATTCCACCGTTTCCATGGGAAACGGCGCAAACGACGTTTCGATGTT
GAAGGAATCCATTCTGGGAATCTGCATCATCGGACCTGAAGGCGCCTCTTCGGAGGCAATTGCCTGCTGTGATCTTGTCA
TAGTCGATATTAACGCCGCCCTGGACCTGCTGCTGAAATCTCACCGGCTGATTGCAACGCTGCGCAGATAG

Upstream 100 bases:

>100_bases
TGACTCAGACCAATCCATGAAGCAGGTGTTGACAACGCCGCTGTAATCGGAGAAGTTGTGGATGAGCCTAAGAGAACAAT
TATCTTGAGGTGAAGAAAGA

Downstream 100 bases:

>100_bases
GAACAAAGTCAGAACTGCGTTAATATTCAACTGTAAAAAATTTTACAATACCATTCTTCCGTCGGATTCAGCCTTATCAA
GCATATTCCTCAAGGCATCT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIEIDIPGKGVYRFEHLVLDLNGTISLDGAVIEGVPKRLESLRRLVDIVIITADTQGKAKELGQDLRVEIHILHPGDEQE
QKLRLVRQLGRDSTVSMGNGANDVSMLKESILGICIIGPEGASSEAIACCDLVIVDINAALDLLLKSHRLIATLRR

Sequences:

>Translated_156_residues
MIEIDIPGKGVYRFEHLVLDLNGTISLDGAVIEGVPKRLESLRRLVDIVIITADTQGKAKELGQDLRVEIHILHPGDEQE
QKLRLVRQLGRDSTVSMGNGANDVSMLKESILGICIIGPEGASSEAIACCDLVIVDINAALDLLLKSHRLIATLRR
>Mature_156_residues
MIEIDIPGKGVYRFEHLVLDLNGTISLDGAVIEGVPKRLESLRRLVDIVIITADTQGKAKELGQDLRVEIHILHPGDEQE
QKLRLVRQLGRDSTVSMGNGANDVSMLKESILGICIIGPEGASSEAIACCDLVIVDINAALDLLLKSHRLIATLRR

Specific function: Unknown

COG id: COG4087

COG function: function code R; Soluble P-type ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16997; Mature: 16997

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEIDIPGKGVYRFEHLVLDLNGTISLDGAVIEGVPKRLESLRRLVDIVIITADTQGKAK
CEEEECCCCCEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHH
ELGQDLRVEIHILHPGDEQEQKLRLVRQLGRDSTVSMGNGANDVSMLKESILGICIIGPE
HCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHEEEEEECCC
GASSEAIACCDLVIVDINAALDLLLKSHRLIATLRR
CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MIEIDIPGKGVYRFEHLVLDLNGTISLDGAVIEGVPKRLESLRRLVDIVIITADTQGKAK
CEEEECCCCCEEEEEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHH
ELGQDLRVEIHILHPGDEQEQKLRLVRQLGRDSTVSMGNGANDVSMLKESILGICIIGPE
HCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHEEEEEECCC
GASSEAIACCDLVIVDINAALDLLLKSHRLIATLRR
CCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]