| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
Click here to switch to the map view.
The map label for this gene is apgM2 [H]
Identifier: 85857978
GI number: 85857978
Start: 136570
End: 137871
Strand: Direct
Name: apgM2 [H]
Synonym: SYN_00621
Alternate gene names: 85857978
Gene position: 136570-137871 (Clockwise)
Preceding gene: 85857977
Following gene: 85857979
Centisome position: 4.3
GC content: 60.45
Gene sequence:
>1302_bases ATGCGCTGCATCCTTCTTCTTCTCGACGGTCTCGGTGACCGGAGCCATCCCGTTCTGGACGGCCAAACCCCCCTCCAGGC CGCCGACACCCCCAATCTCGACAAAATCGCGGCAATCGGCATGAACGGGCTTTTTCATTCCCATCTCCAAGGCGCGGCAT TGCCGAGCGAACTGGCCCACTTTCTCATGTTCGGGTATCGCCTGGAGGAATTTCCCGGCCGGGGTGTGGTCGAAGCGCTT GGGGAAGGTCTCGATGTCCACGAGGGGGATGCGGCCCTCCTGGCCCGGATCTTTTCCGTGGTCAGGGACGGGAACACCCT CGTTCTCCATCATGAGAATCCGAAGCTGGACCGGGAAAGCTGTCAAATTCTCCATGAAGCGGTCGGACGCTTCAGCCGGG ACGGCATTTCAGTGGAGTTTCTGCCCACCAGAGGGATCGCAGGCATCCTCCTGCTCCGTGGGGACGTATTGAGCGCTATC ACCGATTCCAATCCGATTGCCGAAGGGCGTCCTCTCATGCAGGTCCTTCCCTTGCGATCCAAGGTCGAGGATCCCCGCGC CCGAAAAACCGCCGAGGTCCTCAATGCCTATCTCCGCTGGAGCCACCAGACGCTCTCGGAACACCCTCTCAACAAAAACC GGAAAGAACAGGGGCTTCCCCCCATCAACGCCGTCGGCACCCAGCGGGCCGGGATGCTGGGCAGACTGCCTTCGTTTTCG GAAAAGTGGGGGCTCAAGGGGTTGATGATCGCCTCCGGTGCGGTTTACCACGGTATCGGTCAGGTGATCGGCATGGATAT CCGGAAGGTCGGAGATACAAACGACCCAGGCCGGGATCTTCGAGAGCGGCTCGAAAGGGCGCATCGGGCTCGGGAATATG ATTTCATCCACGTCCATACCAAAGTCACGGACGAGGCGGGCCACACGAGAAATCCCCTGATCAAGAAAAGGGTCATCGAG GCGGTCGACTCGGCGCTGGACTACGCCGTTGAAGAAATCATCCCCGATGATGACGTCCTTTTCATCGTGACCGCCGATCA TTCCACCGCCTCCTCCGGAACCATGATCCATACCGGCGAGAGCGTGCCGCTGGTCATGACCGGCAAATACGTGCGGAGGG ATGACGTCCGGAATTTCGACGAGGTCAGCTGCGCCGCCGGCGGGCTCAGCCTCGTCCGGGGAAAGGAGCTCATGTATCTG GTGCTCAACTTCCTGGATCGGGGAAAACTCTGGGGGCTCATGGATTCGCCCGATGACCAGCCGTTCACGCCGGGCCGATA CAGCCCTCTGCTGGTGGACTGA
Upstream 100 bases:
>100_bases TCCCTCCTGTCTGTCGGGGAACAGCAGAAGCAGCCGCTGGCCCTGTTTGCCGCGTAAGAAATCCCAGGGCTGACCGGAGA ATCTTTCCCAGGGAGTTGAC
Downstream 100 bases:
>100_bases ACCCATGAAATGGCTGTTCCCACTGGACGTCCAGCTTTCCGGGAGAGGCGACAAGTTCCGGGGCGGGCTCATTGTCGCTT CCAACCGGGAACCGTACGCA
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM 2; Phosphoglyceromutase 2; aPGAM 2; aPGAM-Mj2 [H]
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MRCILLLLDGLGDRSHPVLDGQTPLQAADTPNLDKIAAIGMNGLFHSHLQGAALPSELAHFLMFGYRLEEFPGRGVVEAL GEGLDVHEGDAALLARIFSVVRDGNTLVLHHENPKLDRESCQILHEAVGRFSRDGISVEFLPTRGIAGILLLRGDVLSAI TDSNPIAEGRPLMQVLPLRSKVEDPRARKTAEVLNAYLRWSHQTLSEHPLNKNRKEQGLPPINAVGTQRAGMLGRLPSFS EKWGLKGLMIASGAVYHGIGQVIGMDIRKVGDTNDPGRDLRERLERAHRAREYDFIHVHTKVTDEAGHTRNPLIKKRVIE AVDSALDYAVEEIIPDDDVLFIVTADHSTASSGTMIHTGESVPLVMTGKYVRRDDVRNFDEVSCAAGGLSLVRGKELMYL VLNFLDRGKLWGLMDSPDDQPFTPGRYSPLLVD
Sequences:
>Translated_433_residues MRCILLLLDGLGDRSHPVLDGQTPLQAADTPNLDKIAAIGMNGLFHSHLQGAALPSELAHFLMFGYRLEEFPGRGVVEAL GEGLDVHEGDAALLARIFSVVRDGNTLVLHHENPKLDRESCQILHEAVGRFSRDGISVEFLPTRGIAGILLLRGDVLSAI TDSNPIAEGRPLMQVLPLRSKVEDPRARKTAEVLNAYLRWSHQTLSEHPLNKNRKEQGLPPINAVGTQRAGMLGRLPSFS EKWGLKGLMIASGAVYHGIGQVIGMDIRKVGDTNDPGRDLRERLERAHRAREYDFIHVHTKVTDEAGHTRNPLIKKRVIE AVDSALDYAVEEIIPDDDVLFIVTADHSTASSGTMIHTGESVPLVMTGKYVRRDDVRNFDEVSCAAGGLSLVRGKELMYL VLNFLDRGKLWGLMDSPDDQPFTPGRYSPLLVD >Mature_433_residues MRCILLLLDGLGDRSHPVLDGQTPLQAADTPNLDKIAAIGMNGLFHSHLQGAALPSELAHFLMFGYRLEEFPGRGVVEAL GEGLDVHEGDAALLARIFSVVRDGNTLVLHHENPKLDRESCQILHEAVGRFSRDGISVEFLPTRGIAGILLLRGDVLSAI TDSNPIAEGRPLMQVLPLRSKVEDPRARKTAEVLNAYLRWSHQTLSEHPLNKNRKEQGLPPINAVGTQRAGMLGRLPSFS EKWGLKGLMIASGAVYHGIGQVIGMDIRKVGDTNDPGRDLRERLERAHRAREYDFIHVHTKVTDEAGHTRNPLIKKRVIE AVDSALDYAVEEIIPDDDVLFIVTADHSTASSGTMIHTGESVPLVMTGKYVRRDDVRNFDEVSCAAGGLSLVRGKELMYL VLNFLDRGKLWGLMDSPDDQPFTPGRYSPLLVD
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR006124 [H]
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 47675; Mature: 47675
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCILLLLDGLGDRSHPVLDGQTPLQAADTPNLDKIAAIGMNGLFHSHLQGAALPSELAH CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH FLMFGYRLEEFPGRGVVEALGEGLDVHEGDAALLARIFSVVRDGNTLVLHHENPKLDRES HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHH CQILHEAVGRFSRDGISVEFLPTRGIAGILLLRGDVLSAITDSNPIAEGRPLMQVLPLRS HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCHHHHHCHHH KVEDPRARKTAEVLNAYLRWSHQTLSEHPLNKNRKEQGLPPINAVGTQRAGMLGRLPSFS HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCH EKWGLKGLMIASGAVYHGIGQVIGMDIRKVGDTNDPGRDLRERLERAHRAREYDFIHVHT HHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE KVTDEAGHTRNPLIKKRVIEAVDSALDYAVEEIIPDDDVLFIVTADHSTASSGTMIHTGE EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEECCC SVPLVMTGKYVRRDDVRNFDEVSCAAGGLSLVRGKELMYLVLNFLDRGKLWGLMDSPDDQ CCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCC PFTPGRYSPLLVD CCCCCCCCCCEEC >Mature Secondary Structure MRCILLLLDGLGDRSHPVLDGQTPLQAADTPNLDKIAAIGMNGLFHSHLQGAALPSELAH CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH FLMFGYRLEEFPGRGVVEALGEGLDVHEGDAALLARIFSVVRDGNTLVLHHENPKLDRES HHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHH CQILHEAVGRFSRDGISVEFLPTRGIAGILLLRGDVLSAITDSNPIAEGRPLMQVLPLRS HHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEHHHHHHHHCCCCCCCCCCCHHHHHCHHH KVEDPRARKTAEVLNAYLRWSHQTLSEHPLNKNRKEQGLPPINAVGTQRAGMLGRLPSFS HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHCCCCCH EKWGLKGLMIASGAVYHGIGQVIGMDIRKVGDTNDPGRDLRERLERAHRAREYDFIHVHT HHHCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE KVTDEAGHTRNPLIKKRVIEAVDSALDYAVEEIIPDDDVLFIVTADHSTASSGTMIHTGE EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEECCC SVPLVMTGKYVRRDDVRNFDEVSCAAGGLSLVRGKELMYLVLNFLDRGKLWGLMDSPDDQ CCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCC PFTPGRYSPLLVD CCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 12062435 [H]