| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is porA [H]
Identifier: 85857930
GI number: 85857930
Start: 85423
End: 86598
Strand: Direct
Name: porA [H]
Synonym: SYN_00155
Alternate gene names: 85857930
Gene position: 85423-86598 (Clockwise)
Preceding gene: 85857929
Following gene: 85857931
Centisome position: 2.69
GC content: 56.8
Gene sequence:
>1176_bases ATGTCGAAACGAATTGGTATGGAAATCGCCTTGGCGGCTGCCGAAGCGGCTGCCCTGTGCAGGCCGGAAGTGATCGCCGC CTATCCCATTACTCCGAACACACATGTACCGGAACACCTGTCTGAGATCGTTGCGGAAGGCCGCCTTGACGCGGAATTCA TCACCGTGGAATCGGAACATTCTGCCATGAGCGCCTGTGCCGGGGCTTCCGGCGCCGGGGCGCGTTCCTTTACGGCAACC AGCTCTCAGGGGCTTCTTTATATGGCTGAAATTCTGGCGATCGTCTCCGCCATGCGGCTGCCGGTCGTTATGATTATCGG GAACCGGGCGCTCTCCGGTCCCCTGAACATCTGGAACGATCACAGCGACATCATGAGCCAGAGAGACATCGGCTGGATTT CCATGTTTGCCGCCAACGGACAGGAAACCGTGGATATGACGATCCAGGCCTTCAAAATCGCTGAACATCAGGACGTCATG CTGCCGGTGAACGTCAATCTCGACGGCTTCCAGTTGACCCATGTGGTGGAGCCGATGTTCATGCCCGACCAGGAAGAGGT GGATCGTTTCCTGCCCCCTTTCAAACCTCTTGCCGCGCTTGATCCCGATCATCCCGTGACGCTCGGGGCGCTGGGGCTGC CGGACATCTATGCCGAAGCCTGCAAAAGCCGGGAGGTTACTCTGCTGAACTCCAAAAAGGTCATTCTCGAAATCTGGAAG GAGTGGGAACAGCAGTTTGGGCGGAAGTACGAACCCATCGAGTCCTACAAAACGGAGGGGGCGGAGGTTCTTCTCATGAC CATGGGATCCATGGGGGAAACAGCGGAGATGGCGATCGATGAGCTGCGTCAGGAAGGAGTAAAAGCTGGCCTACTTAAAC TGAAACTCTGGCGGCCCTTTCCCTTCGAGGAATTGCAGAAGGCGGTCAAGGGAGCGAAGGTGCTGGCTGTTACGGATCGC TGCCTGTCCTATGGCGGGGCTGGCGGTCCGCTCGCTCTGGAAGTGCGTTCGGCCCTTTATGCACAGAAGAAGCGCCCCGC GATCGTGAATTACATCATCGGTCTCGGGGGGCGGGATGTCATGGTGGATCACTTCAAGGATATGATCTCCAGAGCGGCGA AAGCGGATACGGAAAAACCCAAAGAAGCCTATGAATTTTATGGAGTGAGAGGATAA
Upstream 100 bases:
>100_bases TGGATATTTTGCGGCGGATCTTAATTACTGCAAGGGGTGCGGTATCTGCGCACATGAGTGCTGGCCCCTCGCGATCAAGA TGGTGGAGGAGGAATAGGCC
Downstream 100 bases:
>100_bases TGAATACGTTCCAATCCGGTATTGTGGAAAATTTTGACCTTTACGCGCCGAAACTGGTGGACAAGGAAGAATACTTTGCC GCCGGGCATCGCGCCTGCCA
Product: pyruvate:ferredoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSKRIGMEIALAAAEAAALCRPEVIAAYPITPNTHVPEHLSEIVAEGRLDAEFITVESEHSAMSACAGASGAGARSFTAT SSQGLLYMAEILAIVSAMRLPVVMIIGNRALSGPLNIWNDHSDIMSQRDIGWISMFAANGQETVDMTIQAFKIAEHQDVM LPVNVNLDGFQLTHVVEPMFMPDQEEVDRFLPPFKPLAALDPDHPVTLGALGLPDIYAEACKSREVTLLNSKKVILEIWK EWEQQFGRKYEPIESYKTEGAEVLLMTMGSMGETAEMAIDELRQEGVKAGLLKLKLWRPFPFEELQKAVKGAKVLAVTDR CLSYGGAGGPLALEVRSALYAQKKRPAIVNYIIGLGGRDVMVDHFKDMISRAAKADTEKPKEAYEFYGVRG
Sequences:
>Translated_391_residues MSKRIGMEIALAAAEAAALCRPEVIAAYPITPNTHVPEHLSEIVAEGRLDAEFITVESEHSAMSACAGASGAGARSFTAT SSQGLLYMAEILAIVSAMRLPVVMIIGNRALSGPLNIWNDHSDIMSQRDIGWISMFAANGQETVDMTIQAFKIAEHQDVM LPVNVNLDGFQLTHVVEPMFMPDQEEVDRFLPPFKPLAALDPDHPVTLGALGLPDIYAEACKSREVTLLNSKKVILEIWK EWEQQFGRKYEPIESYKTEGAEVLLMTMGSMGETAEMAIDELRQEGVKAGLLKLKLWRPFPFEELQKAVKGAKVLAVTDR CLSYGGAGGPLALEVRSALYAQKKRPAIVNYIIGLGGRDVMVDHFKDMISRAAKADTEKPKEAYEFYGVRG >Mature_390_residues SKRIGMEIALAAAEAAALCRPEVIAAYPITPNTHVPEHLSEIVAEGRLDAEFITVESEHSAMSACAGASGAGARSFTATS SQGLLYMAEILAIVSAMRLPVVMIIGNRALSGPLNIWNDHSDIMSQRDIGWISMFAANGQETVDMTIQAFKIAEHQDVML PVNVNLDGFQLTHVVEPMFMPDQEEVDRFLPPFKPLAALDPDHPVTLGALGLPDIYAEACKSREVTLLNSKKVILEIWKE WEQQFGRKYEPIESYKTEGAEVLLMTMGSMGETAEMAIDELRQEGVKAGLLKLKLWRPFPFEELQKAVKGAKVLAVTDRC LSYGGAGGPLALEVRSALYAQKKRPAIVNYIIGLGGRDVMVDHFKDMISRAAKADTEKPKEAYEFYGVRG
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=341, Percent_Identity=32.5513196480938, Blast_Score=143, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005476 [H]
Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 42854; Mature: 42723
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRIGMEIALAAAEAAALCRPEVIAAYPITPNTHVPEHLSEIVAEGRLDAEFITVESEH CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCH SAMSACAGASGAGARSFTATSSQGLLYMAEILAIVSAMRLPVVMIIGNRALSGPLNIWND HHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC HSDIMSQRDIGWISMFAANGQETVDMTIQAFKIAEHQDVMLPVNVNLDGFQLTHVVEPMF HHHHHHHCCCCEEEEEECCCCCHHHHEEEEEEECCCCCEEEEEECCCCCEEHHHHHCCCC MPDQEEVDRFLPPFKPLAALDPDHPVTLGALGLPDIYAEACKSREVTLLNSKKVILEIWK CCCHHHHHHHCCCCCCHHCCCCCCCEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHH EWEQQFGRKYEPIESYKTEGAEVLLMTMGSMGETAEMAIDELRQEGVKAGLLKLKLWRPF HHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCC PFEELQKAVKGAKVLAVTDRCLSYGGAGGPLALEVRSALYAQKKRPAIVNYIIGLGGRDV CHHHHHHHHCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH MVDHFKDMISRAAKADTEKPKEAYEFYGVRG HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC >Mature Secondary Structure SKRIGMEIALAAAEAAALCRPEVIAAYPITPNTHVPEHLSEIVAEGRLDAEFITVESEH CCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCH SAMSACAGASGAGARSFTATSSQGLLYMAEILAIVSAMRLPVVMIIGNRALSGPLNIWND HHHHHHCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC HSDIMSQRDIGWISMFAANGQETVDMTIQAFKIAEHQDVMLPVNVNLDGFQLTHVVEPMF HHHHHHHCCCCEEEEEECCCCCHHHHEEEEEEECCCCCEEEEEECCCCCEEHHHHHCCCC MPDQEEVDRFLPPFKPLAALDPDHPVTLGALGLPDIYAEACKSREVTLLNSKKVILEIWK CCCHHHHHHHCCCCCCHHCCCCCCCEEEECCCCCHHHHHHHCCCCEEEECCCHHHHHHHH EWEQQFGRKYEPIESYKTEGAEVLLMTMGSMGETAEMAIDELRQEGVKAGLLKLKLWRPF HHHHHHCCCCCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCC PFEELQKAVKGAKVLAVTDRCLSYGGAGGPLALEVRSALYAQKKRPAIVNYIIGLGGRDV CHHHHHHHHCCCEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHH MVDHFKDMISRAAKADTEKPKEAYEFYGVRG HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]