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The map label for this gene is porD [H]

Identifier: 85857929

GI number: 85857929

Start: 85078

End: 85419

Strand: Direct

Name: porD [H]

Synonym: SYN_00156

Alternate gene names: 85857929

Gene position: 85078-85419 (Clockwise)

Preceding gene: 85857928

Following gene: 85857930

Centisome position: 2.68

GC content: 50.58

Gene sequence:

>342_bases
ATGATGAGGTACATCTCGCTTAAATCTCAGATAAAGGTTGAGGTATATAGAATGGCGGAAAAAAAATGGCCAGAAGACTG
GCAGGAAGTCAATCCCGGATGTATCGTCTTTCGACCTGGAAGCTCCAGAGACTACCATACAGGCACTTGGAGGGCGGAAC
GCCCGGTCTGGGATAATTCCAGATGCATCAAATGCGGCCTCTGCTATATATTCTGCCCCGAAGGCTGCATTTCGGAAGAC
GCGGATGGATATTTTGCGGCGGATCTTAATTACTGCAAGGGGTGCGGTATCTGCGCACATGAGTGCTGGCCCCTCGCGAT
CAAGATGGTGGAGGAGGAATAG

Upstream 100 bases:

>100_bases
AAAATGACAGATGTTGTCAAGCTGGAATCCCTGAATGAGCCGATTGAACACCGGTTCGGCCGGATTGCCAACAGGAATCT
GGCGGCCATGAAGCTGGCCT

Downstream 100 bases:

>100_bases
GCCATGTCGAAACGAATTGGTATGGAAATCGCCTTGGCGGCTGCCGAAGCGGCTGCCCTGTGCAGGCCGGAAGTGATCGC
CGCCTATCCCATTACTCCGA

Product: pyruvate:ferredoxin oxidoreductase subunit delta

Products: acetyl-CoA; CO2; reduced ferredoxin

Alternate protein names: Pyruvate oxidoreductase delta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit delta [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MMRYISLKSQIKVEVYRMAEKKWPEDWQEVNPGCIVFRPGSSRDYHTGTWRAERPVWDNSRCIKCGLCYIFCPEGCISED
ADGYFAADLNYCKGCGICAHECWPLAIKMVEEE

Sequences:

>Translated_113_residues
MMRYISLKSQIKVEVYRMAEKKWPEDWQEVNPGCIVFRPGSSRDYHTGTWRAERPVWDNSRCIKCGLCYIFCPEGCISED
ADGYFAADLNYCKGCGICAHECWPLAIKMVEEE
>Mature_113_residues
MMRYISLKSQIKVEVYRMAEKKWPEDWQEVNPGCIVFRPGSSRDYHTGTWRAERPVWDNSRCIKCGLCYIFCPEGCISED
ADGYFAADLNYCKGCGICAHECWPLAIKMVEEE

Specific function: Unknown

COG id: COG1144

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011898 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: 1.2.7.1

Molecular weight: Translated: 13114; Mature: 13114

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
12.4 %Cys+Met (Translated Protein)
8.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
12.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRYISLKSQIKVEVYRMAEKKWPEDWQEVNPGCIVFRPGSSRDYHTGTWRAERPVWDNS
CCEEECCCCHHHHHEEEHHHHCCCCCHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCC
RCIKCGLCYIFCPEGCISEDADGYFAADLNYCKGCGICAHECWPLAIKMVEEE
CEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MMRYISLKSQIKVEVYRMAEKKWPEDWQEVNPGCIVFRPGSSRDYHTGTWRAERPVWDNS
CCEEECCCCHHHHHEEEHHHHCCCCCHHHCCCCEEEECCCCCCCCCCCCEECCCCCCCCC
RCIKCGLCYIFCPEGCISEDADGYFAADLNYCKGCGICAHECWPLAIKMVEEE
CEEEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pyruvate; CoA; oxidized ferredoxin

Specific reaction: pyruvate + CoA + oxidized ferredoxin = acetyl-CoA + CO2 + reduced ferredoxin

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]