Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857852

Identifier: 85857852

GI number: 85857852

Start: 10078

End: 10836

Strand: Direct

Name: 85857852

Synonym: SYN_02045

Alternate gene names: NA

Gene position: 10078-10836 (Clockwise)

Preceding gene: 85857851

Following gene: 85857853

Centisome position: 0.32

GC content: 46.77

Gene sequence:

>759_bases
ATGATGAAATGGGCATTCCAAATCGAGCGGACAACATTAGACCAGAGAAACTTATTAGACTTGCTTGATAGGATAGGATA
TCAACAAGCGGATGTTCCAGGGCTTGATTTAGTTTTTTGCTCGAAGACACTGGAAGCTTGTGTGACCGCTGGCGAGGTCT
GGGAAGAGGCAAAAAGGATTCGAGATTTGATATCAGAGGTCACAGAAATTGATCCTGAATTTACCCTTGGGCCAGTAATC
GATTTGTCCTCAGGAGAGCCAAAACGGCACCACTTTCTGGAGGTAAAATCTGGCATCATCGTTACAACAGGGGTTGATGC
GATTTTGACCGTGTCTCCTCCGGACAATCTCTCTGCAGAACAGCTTATCGAGTACAATAGACGCCGTACTGAACAGGAAT
ATAAGGCTAAGTTGGAAGTGCAGCTATCGAAGCTGGAACCCGCATTTCGTGAGCCTCGCGCAGTCAAAGTGCAACAGCTA
CTCAAGCGAGATTCACACAACGGTGAATCGTTGTACAAGATCTACGAGTTATTAGAGGGGCATCCATCCCACCGCAAGGA
GTTCCATGAACGATTTGGGATTTCCAAAGTTGAGTTCCAACGATTTTCCGATGCTGTCCACAATCCAGTTGTCTCGGGTG
AGTTGGCACGTCACGCCTATGAGGACAAACCGAAAACCGATAATCCTATGACTTTCGCAGAGGCGAAATCTTTTGTTTTG
GGCATTGCCAAGCATTGGCTAGCTTCTCTTCGGACCTAA

Upstream 100 bases:

>100_bases
GTCTCGTTTCCTGAAGATTCAAGGTCAAAGTGGAGATATCCAGAAACTTTAGAATAACTTGTTGTGCGGCAACAAGCTCA
TGGCAGAGTGACGAGGGTAG

Downstream 100 bases:

>100_bases
ACGGACATCCTCGCAGGAGATGGCGTGACTGACATAAAGAGGATATCGCACAACAAGTGCATGCACGCGGACACCGAACC
ACGCGGCGCACATTCGGTGG

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRIRDLISEVTEIDPEFTLGPVI
DLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAEQLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQL
LKRDSHNGESLYKIYELLEGHPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL
GIAKHWLASLRT

Sequences:

>Translated_252_residues
MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRIRDLISEVTEIDPEFTLGPVI
DLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAEQLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQL
LKRDSHNGESLYKIYELLEGHPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL
GIAKHWLASLRT
>Mature_252_residues
MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRIRDLISEVTEIDPEFTLGPVI
DLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAEQLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQL
LKRDSHNGESLYKIYELLEGHPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL
GIAKHWLASLRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28854; Mature: 28854

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRI
CCCHHEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDLISEVTEIDPEFTLGPVIDLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAE
HHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCCHH
QLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQLLKRDSHNGESLYKIYELLEG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
HPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GIAKHWLASLRT
HHHHHHHHHHCC
>Mature Secondary Structure
MMKWAFQIERTTLDQRNLLDLLDRIGYQQADVPGLDLVFCSKTLEACVTAGEVWEEAKRI
CCCHHEEHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RDLISEVTEIDPEFTLGPVIDLSSGEPKRHHFLEVKSGIIVTTGVDAILTVSPPDNLSAE
HHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHCCCEEEEECCCEEEEECCCCCCCHH
QLIEYNRRRTEQEYKAKLEVQLSKLEPAFREPRAVKVQQLLKRDSHNGESLYKIYELLEG
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCC
HPSHRKEFHERFGISKVEFQRFSDAVHNPVVSGELARHAYEDKPKTDNPMTFAEAKSFVL
CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
GIAKHWLASLRT
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA