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The map label for this gene is ybjT [H]

Identifier: 85375744

GI number: 85375744

Start: 2936409

End: 2937359

Strand: Reverse

Name: ybjT [H]

Synonym: ELI_14585

Alternate gene names: 85375744

Gene position: 2937359-2936409 (Counterclockwise)

Preceding gene: 85375747

Following gene: 85375741

Centisome position: 96.23

GC content: 65.09

Gene sequence:

>951_bases
ATGGCCGCCACCGACCCGCTTGCCGACAAACTGATCACCGTCTTCGGCGGCAGCGGGTTTCTCGGCACGCATGTGGCCCA
GGCGCTGCTCGAGCGCGGGGCGCGGCTGCGCATCGCCAGCCGGAACCCGGAGAAGGCCTTCAAGCTCAAGCCGCTCGCCA
ATCTCGGCCAGCTGCAATTTGCGCGCTGCAATATCCTGCGAGAGGACAGCGTCTCCGCCTGCGTCCAGGGCGCGGACATG
GTGGTCAATCTCGTCGGCTCGTTCGAAGGTGACCAGATCGCGCTGATGGGCAAGGCGGCTGGTCAGATCGCGCAGGTCGC
CGCCGATCAGGGCGTCGAGGCGCTGGTACAGGTTTCAGCCATCGGCGCCGATCCGGAAGGGCAGACCGACTACAGCATCG
GTAAGGGACTGGGCGAGAAGCTGGTCCTCGAAGCGTTCCCGAAGGCGACGATACTGCGCCCGTCGATCGTCTTCGGCGCG
GATGACGATTTCCTCAACATGTTCGCCGGACTGATCCAGATGATGCCTGCCCTGCCCGTGTTCGGTCCCAAGGCCGAATT
GCAGCTGGTTCATGTCGACGATGTCGCCGAAGCCATCGCGGTGAGCCTCGCCGATCCCGGCAAGCATGGCGGCAAGATCT
ATGAGCTCGGCGGTCCCGAGGTGCTCACCATGCTCGAAGTGAACGAGCGCATCGCGCAGGCGCAGCGACGCAACCGCGCC
TTCATCCCGATGCCCGATTTCGCCAGCGCTACCTTTGCCGCGCTGCCTCTGACACCGATGAGCAGCGACCAGTGGAAAAT
GCTCAAGGCGGGTAGCACCGTCGCCGCGGACGCGCGCGGATTCAAGCAGCTCGGGATCGAGCCCAGGCCGCTCGGCCTGT
TCCTCGACCGGATGATGGTGCCCTATCGCGAGAAAGGTCGCTTCGCCGAGGATATCGGCTCGGCGACCTAG

Upstream 100 bases:

>100_bases
CATGCTTGCGGGCAGGACCGCCCATCGGAACAGTTGCGGCATGCGGCCCGTTGCTGCATGGGATTGCCTCGCTTCCACCC
CATTTCAGCAGGACAGACCA

Downstream 100 bases:

>100_bases
CGCGCAGCCGCGTCAGCTCTCGCCGCGCGGCGTGTTTTCGATCAGGTTCATCGGTTCGACCAGCAGGATCGCGCCTTCAT
GGCCGGTGACGCGCACACGC

Product: NADH ubiquinone oxidoreductase, putative

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MAATDPLADKLITVFGGSGFLGTHVAQALLERGARLRIASRNPEKAFKLKPLANLGQLQFARCNILREDSVSACVQGADM
VVNLVGSFEGDQIALMGKAAGQIAQVAADQGVEALVQVSAIGADPEGQTDYSIGKGLGEKLVLEAFPKATILRPSIVFGA
DDDFLNMFAGLIQMMPALPVFGPKAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEVNERIAQAQRRNRA
FIPMPDFASATFAALPLTPMSSDQWKMLKAGSTVAADARGFKQLGIEPRPLGLFLDRMMVPYREKGRFAEDIGSAT

Sequences:

>Translated_316_residues
MAATDPLADKLITVFGGSGFLGTHVAQALLERGARLRIASRNPEKAFKLKPLANLGQLQFARCNILREDSVSACVQGADM
VVNLVGSFEGDQIALMGKAAGQIAQVAADQGVEALVQVSAIGADPEGQTDYSIGKGLGEKLVLEAFPKATILRPSIVFGA
DDDFLNMFAGLIQMMPALPVFGPKAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEVNERIAQAQRRNRA
FIPMPDFASATFAALPLTPMSSDQWKMLKAGSTVAADARGFKQLGIEPRPLGLFLDRMMVPYREKGRFAEDIGSAT
>Mature_315_residues
AATDPLADKLITVFGGSGFLGTHVAQALLERGARLRIASRNPEKAFKLKPLANLGQLQFARCNILREDSVSACVQGADMV
VNLVGSFEGDQIALMGKAAGQIAQVAADQGVEALVQVSAIGADPEGQTDYSIGKGLGEKLVLEAFPKATILRPSIVFGAD
DDFLNMFAGLIQMMPALPVFGPKAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEVNERIAQAQRRNRAF
IPMPDFASATFAALPLTPMSSDQWKMLKAGSTVAADARGFKQLGIEPRPLGLFLDRMMVPYREKGRFAEDIGSAT

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=294, Percent_Identity=30.952380952381, Blast_Score=125, Evalue=4e-29,
Organism=Escherichia coli, GI87081793, Length=237, Percent_Identity=26.1603375527426, Blast_Score=75, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17556106, Length=311, Percent_Identity=26.6881028938907, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24667554, Length=242, Percent_Identity=31.404958677686, Blast_Score=111, Evalue=7e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33606; Mature: 33475

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATDPLADKLITVFGGSGFLGTHVAQALLERGARLRIASRNPEKAFKLKPLANLGQLQF
CCCCCHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHEEECCCCCCCCHHH
ARCNILREDSVSACVQGADMVVNLVGSFEGDQIALMGKAAGQIAQVAADQGVEALVQVSA
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHH
IGADPEGQTDYSIGKGLGEKLVLEAFPKATILRPSIVFGADDDFLNMFAGLIQMMPALPV
CCCCCCCCCCCHHHHCCCHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHHHHHCCCC
FGPKAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEVNERIAQAQRRNRA
CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHCCC
FIPMPDFASATFAALPLTPMSSDQWKMLKAGSTVAADARGFKQLGIEPRPLGLFLDRMMV
CCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
PYREKGRFAEDIGSAT
CHHHCCCHHHHHCCCC
>Mature Secondary Structure 
AATDPLADKLITVFGGSGFLGTHVAQALLERGARLRIASRNPEKAFKLKPLANLGQLQF
CCCCHHHHHHHHEECCCCCHHHHHHHHHHHCCCEEEEECCCCCHHEEECCCCCCCCHHH
ARCNILREDSVSACVQGADMVVNLVGSFEGDQIALMGKAAGQIAQVAADQGVEALVQVSA
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHH
IGADPEGQTDYSIGKGLGEKLVLEAFPKATILRPSIVFGADDDFLNMFAGLIQMMPALPV
CCCCCCCCCCCHHHHCCCHHHHHHHCCCCEEECCEEEECCCHHHHHHHHHHHHHHHCCCC
FGPKAELQLVHVDDVAEAIAVSLADPGKHGGKIYELGGPEVLTMLEVNERIAQAQRRNRA
CCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHCCC
FIPMPDFASATFAALPLTPMSSDQWKMLKAGSTVAADARGFKQLGIEPRPLGLFLDRMMV
CCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC
PYREKGRFAEDIGSAT
CHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]