| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is aroE [H]
Identifier: 85375425
GI number: 85375425
Start: 2615815
End: 2616696
Strand: Reverse
Name: aroE [H]
Synonym: ELI_12990
Alternate gene names: 85375425
Gene position: 2616696-2615815 (Counterclockwise)
Preceding gene: 85375426
Following gene: 85375424
Centisome position: 85.73
GC content: 65.08
Gene sequence:
>882_bases ATGAGTATGCCCCCTTCGACAGGCTCACGACAGGCCTACGCCGAAGTCATCGGCGATCCGATCGCGCAGTCCAAATCGCC GTTGATCCACATGTTCTGGATCGCACAGCTCGGGCTCGATGCCCATTATCGTGCGCAAGCGGTCGCGCCGGAGGCACTGG CGCAATATCTGTTCGAGCGGAAGGGCGACGCCAACTGGCGCGGCTGCAACGTCACCATGCCGCACAAGCAGGCGGTTCTG CCGCTGCTCGACCGGCTCGATCCGACGGCCGAGAAGATCGGCGCGGTGAATACCGTGGTGCGCAGCGATGATGGCGTGCT GACCGGATACAATACCGATGTCGTAGGATTCCTCGAGCCACTGCGAGACGAGCTGTCGGGGCACCACCTGTTCCGCATGA CGAGGGTCATCGGCACCGGCGGGGCGGCGCGCGCGATCGTCGCCGGGCTTGCCGGGGAAGGCTTCACGATCGTGCTGGCC GGTCGCGATCCGGAAAAGGCAGCGCGCCTGCTGGAGGAGCTCGGCGGCCCCACCGAACATTTCAACCCGCCGCTATCGCA TTTTGCCGAAGCAACCGACTTCGCCTTCGACGACCGCGAGCAATGTCTCGATCTCGTCGTCAACGCCTCGCCGCTCGGCA TGGCGGGACAGCCGCCGCTCGCTTTTGCGATCTCGCACGCACCGCCCGGATCGATCGTCTATGACATTGTGACCGATCCC ATCGACACCGTGCTGCTGGAGCAGGCGCGCGCGGCGGGATTTCGCACGATCGACGGCCTCGCCATGCTGATCGGTCAGGC GGCGGAGGCATTCGAGCTGTTCTTCGACGCCGCCCCGCCGCGCGACTTTGACCAAGAGCTGCGCGAAAGGCTTCTCGCAT GA
Upstream 100 bases:
>100_bases TGCAGTTGTTCGAGCAGATCATCGGCGACCAGTTTACCGTACTCGGCATGCCGTTGTTGCAGGTTATGGCAGCCCTGCGC GAGCGCGGCGTCCTACAGGC
Downstream 100 bases:
>100_bases ATCGACCCAAGATTATCGGGCTCACCGGTTCGATCGGAATGGGCAAGTCGACCGTCGCCGATATGTTCGAGCGTGCCGGC GTGCCCGTTTTCGATGCCGA
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSMPPSTGSRQAYAEVIGDPIAQSKSPLIHMFWIAQLGLDAHYRAQAVAPEALAQYLFERKGDANWRGCNVTMPHKQAVL PLLDRLDPTAEKIGAVNTVVRSDDGVLTGYNTDVVGFLEPLRDELSGHHLFRMTRVIGTGGAARAIVAGLAGEGFTIVLA GRDPEKAARLLEELGGPTEHFNPPLSHFAEATDFAFDDREQCLDLVVNASPLGMAGQPPLAFAISHAPPGSIVYDIVTDP IDTVLLEQARAAGFRTIDGLAMLIGQAAEAFELFFDAAPPRDFDQELRERLLA
Sequences:
>Translated_293_residues MSMPPSTGSRQAYAEVIGDPIAQSKSPLIHMFWIAQLGLDAHYRAQAVAPEALAQYLFERKGDANWRGCNVTMPHKQAVL PLLDRLDPTAEKIGAVNTVVRSDDGVLTGYNTDVVGFLEPLRDELSGHHLFRMTRVIGTGGAARAIVAGLAGEGFTIVLA GRDPEKAARLLEELGGPTEHFNPPLSHFAEATDFAFDDREQCLDLVVNASPLGMAGQPPLAFAISHAPPGSIVYDIVTDP IDTVLLEQARAAGFRTIDGLAMLIGQAAEAFELFFDAAPPRDFDQELRERLLA >Mature_292_residues SMPPSTGSRQAYAEVIGDPIAQSKSPLIHMFWIAQLGLDAHYRAQAVAPEALAQYLFERKGDANWRGCNVTMPHKQAVLP LLDRLDPTAEKIGAVNTVVRSDDGVLTGYNTDVVGFLEPLRDELSGHHLFRMTRVIGTGGAARAIVAGLAGEGFTIVLAG RDPEKAARLLEELGGPTEHFNPPLSHFAEATDFAFDDREQCLDLVVNASPLGMAGQPPLAFAISHAPPGSIVYDIVTDPI DTVLLEQARAAGFRTIDGLAMLIGQAAEAFELFFDAAPPRDFDQELRERLLA
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=272, Percent_Identity=33.4558823529412, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1789675, Length=286, Percent_Identity=32.5174825174825, Blast_Score=103, Evalue=9e-24, Organism=Saccharomyces cerevisiae, GI6320332, Length=173, Percent_Identity=32.9479768786127, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 31595; Mature: 31464
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPPSTGSRQAYAEVIGDPIAQSKSPLIHMFWIAQLGLDAHYRAQAVAPEALAQYLFER CCCCCCCCCHHHHHHHHCCHHHCCCCCEEHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHC KGDANWRGCNVTMPHKQAVLPLLDRLDPTAEKIGAVNTVVRSDDGVLTGYNTDVVGFLEP CCCCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHEEECCCCEEECCCCCHHHHHHH LRDELSGHHLFRMTRVIGTGGAARAIVAGLAGEGFTIVLAGRDPEKAARLLEELGGPTEH HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHH FNPPLSHFAEATDFAFDDREQCLDLVVNASPLGMAGQPPLAFAISHAPPGSIVYDIVTDP CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEHHHHCH IDTVLLEQARAAGFRTIDGLAMLIGQAAEAFELFFDAAPPRDFDQELRERLLA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SMPPSTGSRQAYAEVIGDPIAQSKSPLIHMFWIAQLGLDAHYRAQAVAPEALAQYLFER CCCCCCCCHHHHHHHHCCHHHCCCCCEEHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHC KGDANWRGCNVTMPHKQAVLPLLDRLDPTAEKIGAVNTVVRSDDGVLTGYNTDVVGFLEP CCCCCCCCCCEECCCHHHHHHHHHCCCHHHHHHHHHHHEEECCCCEEECCCCCHHHHHHH LRDELSGHHLFRMTRVIGTGGAARAIVAGLAGEGFTIVLAGRDPEKAARLLEELGGPTEH HHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHH FNPPLSHFAEATDFAFDDREQCLDLVVNASPLGMAGQPPLAFAISHAPPGSIVYDIVTDP CCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEHHHHCH IDTVLLEQARAAGFRTIDGLAMLIGQAAEAFELFFDAAPPRDFDQELRERLLA HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA