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The map label for this gene is bepC [H]

Identifier: 85375410

GI number: 85375410

Start: 2604824

End: 2606293

Strand: Direct

Name: bepC [H]

Synonym: ELI_12915

Alternate gene names: 85375410

Gene position: 2604824-2606293 (Clockwise)

Preceding gene: 85375409

Following gene: 85375411

Centisome position: 85.34

GC content: 67.41

Gene sequence:

>1470_bases
ATGAAACGTCTCGGGAGGTATCCTGCCCTGCTGTGCGGAGCGTCGCTGCTGGCGGCGAGTCCGGCGCAGGCCGATACCCT
GCGCGAGGCGCTGGTCGAGGCCTACCAGACCAATCCCACACTGCAGGCCGCCCGCGCCAACCAGCGCGCCGAGGACGAGA
ACCCCAATATCCAGCGCGCGCAGGGCCTGCCCAGTGTCACCGCCACCGCGCAATATATCGAATTCCTCAAAACCTCGCCC
AACAGCTTCACCGCCCCTACCCGCACACTGCAGGTCGGTCCCGATCTGACGGTGCCGCTCTATGCCGGCGGCGCGGTCAA
GAATTCGGTCCGGGCGGCTAAGGAACGCGTCGCGGCAGGGCAGGCCAGCCTGCGCGGGACCGAATCGGCCATTTTCAGCC
AGGTCGTCGCCGCATACATGGATGTCCTCCGCGCTCAGGCGCTGGTCGGGCTCAACCTCAATCAGGTGCAGGTGCTGACG
ATCAACCTCGAAGCGACCAGCGACCGCTTCGAGATCGGCGACCTGACCCGCACCGATGTCGCGCAATCGCAATCGCGGCT
GGCGCTGGCCCGCGGCGATCTTCGCAATGCAGAAGCCAATTTGATCCAAGCCCGCGAGTCCTATGCGCAACTGGTCGGCT
CGGGCCCGGACGATCTGCAGCCGCCACCGCCGCTACCCAATTTGCCGGACGACCCGATCGTCGCGGTCGAAACCGCGCTC
GAAAGCAATCCCGATCTCCTAGCCGCGCGCGAGCGGGCGCAGGCGGCGGGCTTCGATACCGAAGTCGCCGGTTCGGGCCG
CCTGCCGACGGTCGGCCTGTTTGCAGGCGGCGACTATACCGACTATTTCGGCACCCTCGCGAGCGGCGTCACCGGCGTGT
CGCAGAGCGAAACTACCGCCAATGCCGGGATCCGCCTCACCGTCCCGATCTTCCAGGGCGGACTTCCCGCGGCGCGCCAA
CGCCAGGCGGCGGCGCGCGAGACGGCTGCGCTCGAACAGGTGATCCAGGCCGAGCGCGAAGTGATCGCCACCACACGAGC
GGCTTTCTCCAGCTACGAGGCTTCGCTCGCGGTCATCGAAAGCTCGCAGCTCGCGGTCCAGGCGGCCGAACTCAGCCTCG
AGGGCGTGCGCGCGGAAAATTCGATCGGCAACCGCACCATCCTCGACGTGCTCAACGCCGAGCAGGAACTCCTGCAGGCC
CGCGCGCAGCTGGTGACGGCGCGGCGCAACGCCTATGTCGCCGGCTTCACCCTGCTGGCCGCCATGGGCAGGGCGGAGGC
GCGCGATCTCGGCCTCGAAGGCGGCGTGCTCTACGATCCGGTCACCAATTATGAGCGAGTCGACGGCCGTATCTGGGACT
GGGACCGCGATCCCACACCTGCCGCGCAATCGACCAGAACCGTTGACATTCCGCCCGCAAATGCGGATGTCCCGGGTGAC
GTCACGGCTTCGGACGACCCGCAACCGTAG

Upstream 100 bases:

>100_bases
GCAAGCGGCAGGGCAAGGACATGGCATTCCTCCCGGTCGCCGACGTTGCGCTACCGCGCCTCCCGGCTTTCGATAGCCCG
AAAGGCTGGAGCTTCTGACC

Downstream 100 bases:

>100_bases
CGCTTAAGGGGGTTTGCAGCATGCGCCAGCAAGGCGAGGCTTCGGTCGAAGAAATTCTCGAATCGATCAAGAAAGTGATT
GCACGCGACAATCGTGCGGG

Product: outer membrane protein TolC, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MKRLGRYPALLCGASLLAASPAQADTLREALVEAYQTNPTLQAARANQRAEDENPNIQRAQGLPSVTATAQYIEFLKTSP
NSFTAPTRTLQVGPDLTVPLYAGGAVKNSVRAAKERVAAGQASLRGTESAIFSQVVAAYMDVLRAQALVGLNLNQVQVLT
INLEATSDRFEIGDLTRTDVAQSQSRLALARGDLRNAEANLIQARESYAQLVGSGPDDLQPPPPLPNLPDDPIVAVETAL
ESNPDLLAARERAQAAGFDTEVAGSGRLPTVGLFAGGDYTDYFGTLASGVTGVSQSETTANAGIRLTVPIFQGGLPAARQ
RQAAARETAALEQVIQAEREVIATTRAAFSSYEASLAVIESSQLAVQAAELSLEGVRAENSIGNRTILDVLNAEQELLQA
RAQLVTARRNAYVAGFTLLAAMGRAEARDLGLEGGVLYDPVTNYERVDGRIWDWDRDPTPAAQSTRTVDIPPANADVPGD
VTASDDPQP

Sequences:

>Translated_489_residues
MKRLGRYPALLCGASLLAASPAQADTLREALVEAYQTNPTLQAARANQRAEDENPNIQRAQGLPSVTATAQYIEFLKTSP
NSFTAPTRTLQVGPDLTVPLYAGGAVKNSVRAAKERVAAGQASLRGTESAIFSQVVAAYMDVLRAQALVGLNLNQVQVLT
INLEATSDRFEIGDLTRTDVAQSQSRLALARGDLRNAEANLIQARESYAQLVGSGPDDLQPPPPLPNLPDDPIVAVETAL
ESNPDLLAARERAQAAGFDTEVAGSGRLPTVGLFAGGDYTDYFGTLASGVTGVSQSETTANAGIRLTVPIFQGGLPAARQ
RQAAARETAALEQVIQAEREVIATTRAAFSSYEASLAVIESSQLAVQAAELSLEGVRAENSIGNRTILDVLNAEQELLQA
RAQLVTARRNAYVAGFTLLAAMGRAEARDLGLEGGVLYDPVTNYERVDGRIWDWDRDPTPAAQSTRTVDIPPANADVPGD
VTASDDPQP
>Mature_489_residues
MKRLGRYPALLCGASLLAASPAQADTLREALVEAYQTNPTLQAARANQRAEDENPNIQRAQGLPSVTATAQYIEFLKTSP
NSFTAPTRTLQVGPDLTVPLYAGGAVKNSVRAAKERVAAGQASLRGTESAIFSQVVAAYMDVLRAQALVGLNLNQVQVLT
INLEATSDRFEIGDLTRTDVAQSQSRLALARGDLRNAEANLIQARESYAQLVGSGPDDLQPPPPLPNLPDDPIVAVETAL
ESNPDLLAARERAQAAGFDTEVAGSGRLPTVGLFAGGDYTDYFGTLASGVTGVSQSETTANAGIRLTVPIFQGGLPAARQ
RQAAARETAALEQVIQAEREVIATTRAAFSSYEASLAVIESSQLAVQAAELSLEGVRAENSIGNRTILDVLNAEQELLQA
RAQLVTARRNAYVAGFTLLAAMGRAEARDLGLEGGVLYDPVTNYERVDGRIWDWDRDPTPAAQSTRTVDIPPANADVPGD
VTASDDPQP

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=466, Percent_Identity=28.1115879828326, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 51770; Mature: 51770

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLGRYPALLCGASLLAASPAQADTLREALVEAYQTNPTLQAARANQRAEDENPNIQRA
CCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHH
QGLPSVTATAQYIEFLKTSPNSFTAPTRTLQVGPDLTVPLYAGGAVKNSVRAAKERVAAG
CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHC
QASLRGTESAIFSQVVAAYMDVLRAQALVGLNLNQVQVLTINLEATSDRFEIGDLTRTDV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEECCCCCHHHH
AQSQSRLALARGDLRNAEANLIQARESYAQLVGSGPDDLQPPPPLPNLPDDPIVAVETAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHH
ESNPDLLAARERAQAAGFDTEVAGSGRLPTVGLFAGGDYTDYFGTLASGVTGVSQSETTA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCC
NAGIRLTVPIFQGGLPAARQRQAAARETAALEQVIQAEREVIATTRAAFSSYEASLAVIE
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
SSQLAVQAAELSLEGVRAENSIGNRTILDVLNAEQELLQARAQLVTARRNAYVAGFTLLA
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AMGRAEARDLGLEGGVLYDPVTNYERVDGRIWDWDRDPTPAAQSTRTVDIPPANADVPGD
HHCCCHHHHCCCCCCEEECCCCCHHHHCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
VTASDDPQP
CCCCCCCCC
>Mature Secondary Structure
MKRLGRYPALLCGASLLAASPAQADTLREALVEAYQTNPTLQAARANQRAEDENPNIQRA
CCCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHH
QGLPSVTATAQYIEFLKTSPNSFTAPTRTLQVGPDLTVPLYAGGAVKNSVRAAKERVAAG
CCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHC
QASLRGTESAIFSQVVAAYMDVLRAQALVGLNLNQVQVLTINLEATSDRFEIGDLTRTDV
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEECCCCCHHHH
AQSQSRLALARGDLRNAEANLIQARESYAQLVGSGPDDLQPPPPLPNLPDDPIVAVETAL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHH
ESNPDLLAARERAQAAGFDTEVAGSGRLPTVGLFAGGDYTDYFGTLASGVTGVSQSETTA
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCC
NAGIRLTVPIFQGGLPAARQRQAAARETAALEQVIQAEREVIATTRAAFSSYEASLAVIE
CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
SSQLAVQAAELSLEGVRAENSIGNRTILDVLNAEQELLQARAQLVTARRNAYVAGFTLLA
CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
AMGRAEARDLGLEGGVLYDPVTNYERVDGRIWDWDRDPTPAAQSTRTVDIPPANADVPGD
HHCCCHHHHCCCCCCEEECCCCCHHHHCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCC
VTASDDPQP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]