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The map label for this gene is sufC [C]

Identifier: 85375379

GI number: 85375379

Start: 2578179

End: 2578928

Strand: Reverse

Name: sufC [C]

Synonym: ELI_12760

Alternate gene names: 85375379

Gene position: 2578928-2578179 (Counterclockwise)

Preceding gene: 85375380

Following gene: 85375378

Centisome position: 84.49

GC content: 63.07

Gene sequence:

>750_bases
ATGCTCAAGATTGAAAACCTTCACGCCGAGATTGACGGCAAACAGATCCTCAACGGCCTGACGCTGGAAGTGCAGGCGGG
CGAAGTGCATGCCATCATGGGCCCCAACGGCGCTGGCAAGTCCACGCTCGCCTATGTACTGGGCGGCCGACCTGGCTATG
AAGTGACTGCAGGCTCGGTCACGTTCATGGGGCAGGATTTGTTCGCCATGGAACCGCACGAACGCGCGGCGGCGGGGCTG
TTCCTCGGCTTTCAGTACCCGGTCGAGATCCCCGGCGTCTCCAACGTCCAGTTCCTGCGCGAAGCGCTCAATGCGCAGCG
TACCGCGCGCGGGGAAGAGCCGCTGTCGGGCGGCGATTTCCTCAAGCTTGCCAAGGAAAAGGCCGGGCTGCTCAAGCTCG
ACATGGAAATGCTCAAGCGGCAGGTGAATGTCGGCTTCTCGGGCGGCGAGAAGAAGCGCGCCGAAATGGTCCAGATGGGC
ATTCTCGACCCGACCTTCGCTGTCCTCGACGAGACCGATAGCGGCTTGGATATCGATGCGCTGCGCGTCGTCGGCGAAGG
GATCAATGCGATCATGCGCGATCCCGCCAAGGGCGTGCTCCTGATCACGCACTACCAGCGCCTGCTCGAAGTGGTGAAGC
CCGACAAGGTCAGCATCCTCGCCGCCGGGCGCATCGTCCAGACCGGCGGTCCCGAAATCGCAGTGCGCCTGGAAGACGAA
GGCTACGACGCGGTGATGGCCGATGCGTGA

Upstream 100 bases:

>100_bases
TTTGCCTACCAGCGCCAGCTCCAGCGCTTCAACTCGCTCATCGTGATCGAACAACGCCGCTGCGCCGCAGCGGGACAACG
GGAACTTGCAGATTTCGACA

Downstream 100 bases:

>100_bases
GGTGGCGGCTCTTCCCACCCGCCGTGACGAGGCGTGGCGCTATGCCGATATCGAGGCGCTCGAGCGGCTCGGTGTGGACG
CGCTCGATGTGTGGAAAGAA

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLKIENLHAEIDGKQILNGLTLEVQAGEVHAIMGPNGAGKSTLAYVLGGRPGYEVTAGSVTFMGQDLFAMEPHERAAAGL
FLGFQYPVEIPGVSNVQFLREALNAQRTARGEEPLSGGDFLKLAKEKAGLLKLDMEMLKRQVNVGFSGGEKKRAEMVQMG
ILDPTFAVLDETDSGLDIDALRVVGEGINAIMRDPAKGVLLITHYQRLLEVVKPDKVSILAAGRIVQTGGPEIAVRLEDE
GYDAVMADA

Sequences:

>Translated_249_residues
MLKIENLHAEIDGKQILNGLTLEVQAGEVHAIMGPNGAGKSTLAYVLGGRPGYEVTAGSVTFMGQDLFAMEPHERAAAGL
FLGFQYPVEIPGVSNVQFLREALNAQRTARGEEPLSGGDFLKLAKEKAGLLKLDMEMLKRQVNVGFSGGEKKRAEMVQMG
ILDPTFAVLDETDSGLDIDALRVVGEGINAIMRDPAKGVLLITHYQRLLEVVKPDKVSILAAGRIVQTGGPEIAVRLEDE
GYDAVMADA
>Mature_249_residues
MLKIENLHAEIDGKQILNGLTLEVQAGEVHAIMGPNGAGKSTLAYVLGGRPGYEVTAGSVTFMGQDLFAMEPHERAAAGL
FLGFQYPVEIPGVSNVQFLREALNAQRTARGEEPLSGGDFLKLAKEKAGLLKLDMEMLKRQVNVGFSGGEKKRAEMVQMG
ILDPTFAVLDETDSGLDIDALRVVGEGINAIMRDPAKGVLLITHYQRLLEVVKPDKVSILAAGRIVQTGGPEIAVRLEDE
GYDAVMADA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=242, Percent_Identity=55.3719008264463, Blast_Score=282, Evalue=1e-77,
Organism=Escherichia coli, GI1788761, Length=236, Percent_Identity=23.728813559322, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789593, Length=242, Percent_Identity=27.6859504132231, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=29.4372294372294, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787370, Length=221, Percent_Identity=23.0769230769231, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87081791, Length=232, Percent_Identity=24.5689655172414, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1789891, Length=226, Percent_Identity=27.8761061946903, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=253, Percent_Identity=27.6679841897233, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786319, Length=234, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193209708, Length=221, Percent_Identity=27.6018099547511, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=228, Percent_Identity=29.3859649122807, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193202349, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319856, Length=239, Percent_Identity=26.3598326359833, Blast_Score=63, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=226, Percent_Identity=25.6637168141593, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26700; Mature: 26700

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIENLHAEIDGKQILNGLTLEVQAGEVHAIMGPNGAGKSTLAYVLGGRPGYEVTAGSV
CCEECCEEEECCHHHHHCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCEEECCEE
TFMGQDLFAMEPHERAAAGLFLGFQYPVEIPGVSNVQFLREALNAQRTARGEEPLSGGDF
EEECCCEEEECCHHHHHHEEEEEEECCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
LKLAKEKAGLLKLDMEMLKRQVNVGFSGGEKKRAEMVQMGILDPTFAVLDETDSGLDIDA
HHHHHHHCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHH
LRVVGEGINAIMRDPAKGVLLITHYQRLLEVVKPDKVSILAAGRIVQTGGPEIAVRLEDE
HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEEEEECCC
GYDAVMADA
CCCEEECCC
>Mature Secondary Structure
MLKIENLHAEIDGKQILNGLTLEVQAGEVHAIMGPNGAGKSTLAYVLGGRPGYEVTAGSV
CCEECCEEEECCHHHHHCCEEEEEECCCEEEEECCCCCCCCEEEEEECCCCCCEEECCEE
TFMGQDLFAMEPHERAAAGLFLGFQYPVEIPGVSNVQFLREALNAQRTARGEEPLSGGDF
EEECCCEEEECCHHHHHHEEEEEEECCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH
LKLAKEKAGLLKLDMEMLKRQVNVGFSGGEKKRAEMVQMGILDPTFAVLDETDSGLDIDA
HHHHHHHCCEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEECCCCCCCHHH
LRVVGEGINAIMRDPAKGVLLITHYQRLLEVVKPDKVSILAAGRIVQTGGPEIAVRLEDE
HHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCCCEEEEEECEEEECCCCEEEEEECCC
GYDAVMADA
CCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]