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The map label for this gene is sufD [H]

Identifier: 85375378

GI number: 85375378

Start: 2577431

End: 2578186

Strand: Reverse

Name: sufD [H]

Synonym: ELI_12755

Alternate gene names: 85375378

Gene position: 2578186-2577431 (Counterclockwise)

Preceding gene: 85375379

Following gene: 85375377

Centisome position: 84.46

GC content: 66.01

Gene sequence:

>756_bases
ATGCGTGAGGTGGCGGCTCTTCCCACCCGCCGTGACGAGGCGTGGCGCTATGCCGATATCGAGGCGCTCGAGCGGCTCGG
TGTGGACGCGCTCGATGTGTGGAAAGAAGTCACCCTCGCGCCGGGCGAGACGCGCAGCCATTGCATGGTCGTCGGCAGCG
ATGCGCCCGAATTGCATCGCGTCCGCCTGACGATCGGCGAAGGCGCGCGGGCGGAGATGTTCACCGTGATCGCGGGTAGC
GACTATTGCCGGGTCGAAGTCGAAGTCCGGCTCGCGAAGGGGGCGCATTTCGAATTCGGCGGGGTCACCATCGGCGGCGG
CGATGCGGTGCGCGAATTCGTGACGCACACCGTCCATGCCGAGCCGGAAGCGACCTCCAACCAGGTCGTGCGCGCGGTGC
ACTGGGACCAAGGCAGCGGCAATTTCCTCGGCGCGATCGATGTCGTGCGCGATGCGCAGAAGACCGACGCGGCGCAGGAT
TTCAAGGGCTTGCTGCTGAACAAGGGCGCGAGCGCGAACGCCGTGCCGCAACTGGAAATTTTCGCCGACGATGTGAAATG
CGCGCATGGCGCGACGGTCGGCCAGCTCGACGAAATGGCCCGCTACTACATGGCCGCACGCGGCATCCCGCCGCACACCG
CCAAGAAGCTGCTCGTCCGCGCTTTCATCGCCGACGCTTTCGTGGCGATTGGAGACGAGGCCGAGCAGGAACGTTTGCTC
GAAGCCGCGCTCGACGTGCTTGGGGATACGCTGTGA

Upstream 100 bases:

>100_bases
GACAAGGTCAGCATCCTCGCCGCCGGGCGCATCGTCCAGACCGGCGGTCCCGAAATCGCAGTGCGCCTGGAAGACGAAGG
CTACGACGCGGTGATGGCCG

Downstream 100 bases:

>100_bases
CGACCACCGATCAGCCAACTTCCGTACGCCCTGAGCCTGTCGAAGGGCAGGCGAAACGCTTGGGCGCGGAGCAAGGCGGT
GGCTGGGCTTCGACAGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MREVAALPTRRDEAWRYADIEALERLGVDALDVWKEVTLAPGETRSHCMVVGSDAPELHRVRLTIGEGARAEMFTVIAGS
DYCRVEVEVRLAKGAHFEFGGVTIGGGDAVREFVTHTVHAEPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQD
FKGLLLNKGASANAVPQLEIFADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAFIADAFVAIGDEAEQERLL
EAALDVLGDTL

Sequences:

>Translated_251_residues
MREVAALPTRRDEAWRYADIEALERLGVDALDVWKEVTLAPGETRSHCMVVGSDAPELHRVRLTIGEGARAEMFTVIAGS
DYCRVEVEVRLAKGAHFEFGGVTIGGGDAVREFVTHTVHAEPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQD
FKGLLLNKGASANAVPQLEIFADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAFIADAFVAIGDEAEQERLL
EAALDVLGDTL
>Mature_251_residues
MREVAALPTRRDEAWRYADIEALERLGVDALDVWKEVTLAPGETRSHCMVVGSDAPELHRVRLTIGEGARAEMFTVIAGS
DYCRVEVEVRLAKGAHFEFGGVTIGGGDAVREFVTHTVHAEPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQD
FKGLLLNKGASANAVPQLEIFADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAFIADAFVAIGDEAEQERLL
EAALDVLGDTL

Specific function: The sufBCD complex acts synergistically with sufE to stimulate the cysteine desulfurase activity of sufS. The sufBCD complex contributes to the assembly or repair of oxygen-labile iron-sulfur clusters under oxidative stress. May facilitate iron uptake fro

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=122, Percent_Identity=38.5245901639344, Blast_Score=92, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 27150; Mature: 27150

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREVAALPTRRDEAWRYADIEALERLGVDALDVWKEVTLAPGETRSHCMVVGSDAPELHR
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE
VRLTIGEGARAEMFTVIAGSDYCRVEVEVRLAKGAHFEFGGVTIGGGDAVREFVTHTVHA
EEEEECCCCCEEEEEEEECCCEEEEEEEEEEECCCEEEECCEEECCHHHHHHHHHHHHCC
EPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQDFKGLLLNKGASANAVPQLEI
CCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
FADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAFIADAFVAIGDEAEQERLL
EECCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EAALDVLGDTL
HHHHHHHCCCC
>Mature Secondary Structure
MREVAALPTRRDEAWRYADIEALERLGVDALDVWKEVTLAPGETRSHCMVVGSDAPELHR
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEE
VRLTIGEGARAEMFTVIAGSDYCRVEVEVRLAKGAHFEFGGVTIGGGDAVREFVTHTVHA
EEEEECCCCCEEEEEEEECCCEEEEEEEEEEECCCEEEECCEEECCHHHHHHHHHHHHCC
EPEATSNQVVRAVHWDQGSGNFLGAIDVVRDAQKTDAAQDFKGLLLNKGASANAVPQLEI
CCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
FADDVKCAHGATVGQLDEMARYYMAARGIPPHTAKKLLVRAFIADAFVAIGDEAEQERLL
EECCHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EAALDVLGDTL
HHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10322040 [H]