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The map label for this gene is yfhF [C]

Identifier: 85375375

GI number: 85375375

Start: 2575250

End: 2575609

Strand: Reverse

Name: yfhF [C]

Synonym: ELI_12740

Alternate gene names: 85375375

Gene position: 2575609-2575250 (Counterclockwise)

Preceding gene: 85375376

Following gene: 85375371

Centisome position: 84.38

GC content: 63.33

Gene sequence:

>360_bases
ATGGCCGACACCAAGACCCGCCCCGCCCCGAAGGCCGCCGTGATCCTCACGCCGGCTGCCGAACAACGCGTCGCTGACTT
GATGGCGAAGGCGCCCGAGGATGCGATCGGGGTCAAGCTCTCGACGCCGCGCCGTGGGTGTTCAGGCCTCGCTTACTCGG
TCGATTATGTCACCGAGGAAGCCAAGTTCGACGAGAAGATCGAGACGCCCGGTGGGGTGTTCTACATCGATGGTGCGAGC
GTGCTCTACCTGATCGGCAGCACGATGGACTGGGTGGAAGACGACTTCACCGCCGGATTCGTATTCGAAAACCCCAACGC
CAAGGGCGCGTGCGGCTGCGGCGAGAGCTTTATGGTCTGA

Upstream 100 bases:

>100_bases
TGCCGGGTGTACGCGATGCCGAGGTCAATCTCGTGTGGGACCCGCCGTGGGGCCCCGACAAGATGACCGACGAAGCGCGG
CTTGAATTGGGGATGCTGTG

Downstream 100 bases:

>100_bases
GCGTTAGTCCAGCTCCGCCTCGATCCGCTCGATCAGCGCTTTTTCCAGCGGGTCGAGCTGGCCGTCGGCTTCGATCATAC
CGTTCAGCCATCTGGCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MADTKTRPAPKAAVILTPAAEQRVADLMAKAPEDAIGVKLSTPRRGCSGLAYSVDYVTEEAKFDEKIETPGGVFYIDGAS
VLYLIGSTMDWVEDDFTAGFVFENPNAKGACGCGESFMV

Sequences:

>Translated_119_residues
MADTKTRPAPKAAVILTPAAEQRVADLMAKAPEDAIGVKLSTPRRGCSGLAYSVDYVTEEAKFDEKIETPGGVFYIDGAS
VLYLIGSTMDWVEDDFTAGFVFENPNAKGACGCGESFMV
>Mature_118_residues
ADTKTRPAPKAAVILTPAAEQRVADLMAKAPEDAIGVKLSTPRRGCSGLAYSVDYVTEEAKFDEKIETPGGVFYIDGASV
LYLIGSTMDWVEDDFTAGFVFENPNAKGACGCGESFMV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=119, Percent_Identity=40.3361344537815, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788877, Length=107, Percent_Identity=37.3831775700935, Blast_Score=78, Evalue=2e-16,
Organism=Escherichia coli, GI1787974, Length=107, Percent_Identity=36.4485981308411, Blast_Score=76, Evalue=6e-16,
Organism=Escherichia coli, GI1786351, Length=104, Percent_Identity=32.6923076923077, Blast_Score=64, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25146411, Length=109, Percent_Identity=43.1192660550459, Blast_Score=102, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI193209025, Length=109, Percent_Identity=43.1192660550459, Blast_Score=102, Evalue=5e-23,
Organism=Saccharomyces cerevisiae, GI6323001, Length=108, Percent_Identity=47.2222222222222, Blast_Score=111, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24642263, Length=107, Percent_Identity=45.7943925233645, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12662; Mature: 12531

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTKTRPAPKAAVILTPAAEQRVADLMAKAPEDAIGVKLSTPRRGCSGLAYSVDYVTEE
CCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEHHHCCC
AKFDEKIETPGGVFYIDGASVLYLIGSTMDWVEDDFTAGFVFENPNAKGACGCGESFMV
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADTKTRPAPKAAVILTPAAEQRVADLMAKAPEDAIGVKLSTPRRGCSGLAYSVDYVTEE
CCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEHHHCCC
AKFDEKIETPGGVFYIDGASVLYLIGSTMDWVEDDFTAGFVFENPNAKGACGCGESFMV
CCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]