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The map label for this gene is yafE [C]

Identifier: 85375161

GI number: 85375161

Start: 2351152

End: 2351889

Strand: Reverse

Name: yafE [C]

Synonym: ELI_11670

Alternate gene names: 85375161

Gene position: 2351889-2351152 (Counterclockwise)

Preceding gene: 85375162

Following gene: 85375159

Centisome position: 77.05

GC content: 66.53

Gene sequence:

>738_bases
ATGAGCGTGCTCTACGACACCATCGGCATTGATTACGCCAACCTGCGCAAGCCCGATTTGCGCATCGCGGCGCAGATCGA
TGCGGCGCTGGGCGATGCGCAATCTGTGCTGAATGTTGGCGCGGGGGCGGGCTCCTACGAACCGGCCGGGCGCGCCGTCA
CTGCGCTCGAACCTTCGGCCGAGATGATCGCGCAGCGGCCCGAGGGAACGGCGCCGGTCGTGCAGGGTCCAGCCGAAGAC
CTGCCGTTTGCGGATAATAGCTTCGACGCGGCGATGGCGGTACTGACCATCCACCACTGGAGCGACAAGGCGAGGGGCCT
TGCCGAGATGCGCCGCGTCGCGCGCAATCGGGCCGTGCTGCTGACCTACGACCCGGCTTTTCGCGGCCAATGGCAGACCG
AATACTGGCCCGGCCTGATCGGCCTCGACGATGGCGCGATGCCACCAATGGCATTTTTCGAAGAGCACCTAGGCCCGGTC
GATACCCAGCCCGTGCTCGTGCCGCACGATTGCAGCGACGGCTTCCTCTATGCCTATTGGCGCCGCCCGCAGGCCTACCT
TGACCCGCGCATTCGCAAGGGCAGCTCAGGCTTCTGGATGATCGACGGCGTCGAGGAAGGGGCGCAGCGGCTGCAAGCGG
ACCTCGCCAGCGGTGCATGGGCCGCGCGCCACGCCGCGCTGCTCGAACGCGAGAACGCCGATATGGGCTACCGCCTCGTT
ATCGCCGACCTCGTTTAG

Upstream 100 bases:

>100_bases
GTCCAGCAGCATGGCTATACGATCGAAGACGTTACTACCCGCGAAGCCGACTTGGAAGATGTGTTCATCCAGCTGACACG
GGCCGGCTGAGAGGCGCGGA

Downstream 100 bases:

>100_bases
CGCGGCCGCTGCCCAAGCCCCGCATCATGCATCGGCGGTACGATCCAGTGCCCCTCGGGCTCCTGCTCCAGTACCTGCCG
ACAGCGCGAGCAATGGCTCG

Product: merR family transcriptional regulator

Products: NA

Alternate protein names: MerR Family Transcriptional Regulator; MerR-Family Transcriptional Regulator; SAM-Dependent Methyltransferase; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Methyltransferase Domain Family

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSVLYDTIGIDYANLRKPDLRIAAQIDAALGDAQSVLNVGAGAGSYEPAGRAVTALEPSAEMIAQRPEGTAPVVQGPAED
LPFADNSFDAAMAVLTIHHWSDKARGLAEMRRVARNRAVLLTYDPAFRGQWQTEYWPGLIGLDDGAMPPMAFFEEHLGPV
DTQPVLVPHDCSDGFLYAYWRRPQAYLDPRIRKGSSGFWMIDGVEEGAQRLQADLASGAWAARHAALLERENADMGYRLV
IADLV

Sequences:

>Translated_245_residues
MSVLYDTIGIDYANLRKPDLRIAAQIDAALGDAQSVLNVGAGAGSYEPAGRAVTALEPSAEMIAQRPEGTAPVVQGPAED
LPFADNSFDAAMAVLTIHHWSDKARGLAEMRRVARNRAVLLTYDPAFRGQWQTEYWPGLIGLDDGAMPPMAFFEEHLGPV
DTQPVLVPHDCSDGFLYAYWRRPQAYLDPRIRKGSSGFWMIDGVEEGAQRLQADLASGAWAARHAALLERENADMGYRLV
IADLV
>Mature_244_residues
SVLYDTIGIDYANLRKPDLRIAAQIDAALGDAQSVLNVGAGAGSYEPAGRAVTALEPSAEMIAQRPEGTAPVVQGPAEDL
PFADNSFDAAMAVLTIHHWSDKARGLAEMRRVARNRAVLLTYDPAFRGQWQTEYWPGLIGLDDGAMPPMAFFEEHLGPVD
TQPVLVPHDCSDGFLYAYWRRPQAYLDPRIRKGSSGFWMIDGVEEGAQRLQADLASGAWAARHAALLERENADMGYRLVI
ADLV

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26753; Mature: 26622

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLYDTIGIDYANLRKPDLRIAAQIDAALGDAQSVLNVGAGAGSYEPAGRAVTALEPSA
CCEEEHHHCCCHHHCCCCCEEEEEEHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEECCCH
EMIAQRPEGTAPVVQGPAEDLPFADNSFDAAMAVLTIHHWSDKARGLAEMRRVARNRAVL
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHHHCCEEE
LTYDPAFRGQWQTEYWPGLIGLDDGAMPPMAFFEEHLGPVDTQPVLVPHDCSDGFLYAYW
EEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEE
RRPQAYLDPRIRKGSSGFWMIDGVEEGAQRLQADLASGAWAARHAALLERENADMGYRLV
ECCHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEE
IADLV
EEECC
>Mature Secondary Structure 
SVLYDTIGIDYANLRKPDLRIAAQIDAALGDAQSVLNVGAGAGSYEPAGRAVTALEPSA
CEEEHHHCCCHHHCCCCCEEEEEEHHHHHCHHHHHHHHCCCCCCCCCCCCEEEEECCCH
EMIAQRPEGTAPVVQGPAEDLPFADNSFDAAMAVLTIHHWSDKARGLAEMRRVARNRAVL
HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCHHHHHHHHHHHHHCCEEE
LTYDPAFRGQWQTEYWPGLIGLDDGAMPPMAFFEEHLGPVDTQPVLVPHDCSDGFLYAYW
EEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEE
RRPQAYLDPRIRKGSSGFWMIDGVEEGAQRLQADLASGAWAARHAALLERENADMGYRLV
ECCHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEE
IADLV
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA