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The map label for this gene is cbdC [H]

Identifier: 85375124

GI number: 85375124

Start: 2321376

End: 2322101

Strand: Reverse

Name: cbdC [H]

Synonym: ELI_11485

Alternate gene names: 85375124

Gene position: 2322101-2321376 (Counterclockwise)

Preceding gene: 85375128

Following gene: 85375119

Centisome position: 76.07

GC content: 62.26

Gene sequence:

>726_bases
GTGAAGGGCGGCGGCCAACGCTGGCCCGCAAACCGCAATCAGGAATACGCCCGCATGTCCCACTTGCTCACGCTGCAATC
GATCCGGTCCGTTACGCACAACGTGAACGAGCTTACCTTCCCGAAACCCGATGGATTCGATTTCCGCCCGGGGCAGGCGA
CGGACTTCGCGCTCGACCGAGACGGCTGGCGCGACGAGCAACACCCTTTCACCTTCGCTTCACTGCCCGCTGCGGATCAC
CTGCAATTCGTCATCAAATCCTATCCCTCCCATGATGGCGTGACCGAGCAGATCGGGCAGATGCAGCCGGGTGACGGTGT
CATGATCGAAGACCCGTGGGGCGCGATCGAAGACAGGGGGCCGGGCACGATCATCGCTGGCGGGGCGGGGATCACGCCTT
TCATTGCGATCCTGCGCGCGCGGCAGGCGGAGCACGGCGATCTCGAAGGCTATCGCCTGATCTTCTCCAACAGCGAGGAG
AAGGACATCATCCTGCGCGACGAGCTGGAAAAGATGCCGGGGCTCAAGCTCGACCTCGTGCTGACCGACGAGAATGTCCA
AGGCCTGCACCACGGCCAGATCGACGGAGAATTTCTTGAACAGGTCGGCGTCGATTTCAACGGTATTGTCTATCTGTGCG
GCCCGCCGCCAATGGAAGAAGACCTCGCCACAGCGCTCAAGGCCCGCGGCGTGACCGACGACAGGCTGGTGCGGGAGGAA
GACTAA

Upstream 100 bases:

>100_bases
CTCGTTTCGCGTGTCCTCACCCTATCGCCGATGGTCGAGACTTGTCGACCGGCTGCGCGCGGTAGTGGGAACCGCCGTAG
AAAGCGGCTCGTTGAAAAGG

Downstream 100 bases:

>100_bases
AGCGCCGAAGTCAGGCTTCGGAAGAAGCTTGCGGGGTGCGCGGCAGCACGCCGCTCTGGCTCGAAATAGCAAGCAACCGT
CCGCCCTCGCTGAAATGCCG

Product: putative oxidoreductase

Products: NA

Alternate protein names: Ferredoxin; Ferredoxin--NAD(+) reductase [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKGGGQRWPANRNQEYARMSHLLTLQSIRSVTHNVNELTFPKPDGFDFRPGQATDFALDRDGWRDEQHPFTFASLPAADH
LQFVIKSYPSHDGVTEQIGQMQPGDGVMIEDPWGAIEDRGPGTIIAGGAGITPFIAILRARQAEHGDLEGYRLIFSNSEE
KDIILRDELEKMPGLKLDLVLTDENVQGLHHGQIDGEFLEQVGVDFNGIVYLCGPPPMEEDLATALKARGVTDDRLVREE
D

Sequences:

>Translated_241_residues
MKGGGQRWPANRNQEYARMSHLLTLQSIRSVTHNVNELTFPKPDGFDFRPGQATDFALDRDGWRDEQHPFTFASLPAADH
LQFVIKSYPSHDGVTEQIGQMQPGDGVMIEDPWGAIEDRGPGTIIAGGAGITPFIAILRARQAEHGDLEGYRLIFSNSEE
KDIILRDELEKMPGLKLDLVLTDENVQGLHHGQIDGEFLEQVGVDFNGIVYLCGPPPMEEDLATALKARGVTDDRLVREE
D
>Mature_241_residues
MKGGGQRWPANRNQEYARMSHLLTLQSIRSVTHNVNELTFPKPDGFDFRPGQATDFALDRDGWRDEQHPFTFASLPAADH
LQFVIKSYPSHDGVTEQIGQMQPGDGVMIEDPWGAIEDRGPGTIIAGGAGITPFIAILRARQAEHGDLEGYRLIFSNSEE
KDIILRDELEKMPGLKLDLVLTDENVQGLHHGQIDGEFLEQVGVDFNGIVYLCGPPPMEEDLATALKARGVTDDRLVREE
D

Specific function: Electron transfer component of 2-halobenzoate 1,2- dioxygenase system [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322146, Length=208, Percent_Identity=28.8461538461538, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR001221
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.3 [H]

Molecular weight: Translated: 26788; Mature: 26788

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGGGQRWPANRNQEYARMSHLLTLQSIRSVTHNVNELTFPKPDGFDFRPGQATDFALDR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECC
DGWRDEQHPFTFASLPAADHLQFVIKSYPSHDGVTEQIGQMQPGDGVMIEDPWGAIEDRG
CCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCC
PGTIIAGGAGITPFIAILRARQAEHGDLEGYRLIFSNSEEKDIILRDELEKMPGLKLDLV
CCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEHHHHHHCCCCEEEEE
LTDENVQGLHHGQIDGEFLEQVGVDFNGIVYLCGPPPMEEDLATALKARGVTDDRLVREE
EECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCC
D
C
>Mature Secondary Structure
MKGGGQRWPANRNQEYARMSHLLTLQSIRSVTHNVNELTFPKPDGFDFRPGQATDFALDR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECC
DGWRDEQHPFTFASLPAADHLQFVIKSYPSHDGVTEQIGQMQPGDGVMIEDPWGAIEDRG
CCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCC
PGTIIAGGAGITPFIAILRARQAEHGDLEGYRLIFSNSEEKDIILRDELEKMPGLKLDLV
CCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEHHHHHHCCCCEEEEE
LTDENVQGLHHGQIDGEFLEQVGVDFNGIVYLCGPPPMEEDLATALKARGVTDDRLVREE
EECCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7530709; 1370284 [H]