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The map label for this gene is 85374509

Identifier: 85374509

GI number: 85374509

Start: 1721796

End: 1722818

Strand: Reverse

Name: 85374509

Synonym: ELI_08410

Alternate gene names: NA

Gene position: 1722818-1721796 (Counterclockwise)

Preceding gene: 85374512

Following gene: 85374508

Centisome position: 56.44

GC content: 63.54

Gene sequence:

>1023_bases
ATGGCCACGCACCCCGACGACCTGATCTATGTCGACGACAGCCTGCCCGGCATCAGCCGCAAGGGTGCGGGTCGCGGCTT
TGCCTATTACGATCCCAAGGGTCGGCTTATCAAATGCCTGAAGGAAAAGGCGCGGCTCAACGCCATCGCGCTGCCGCCGG
CCTATCGCGATGCCTGGTTCTGCCCCGCGCCCAACGGCCATATCCTGGCCACCGGCTATGACGATCGCGGGCGCAAGCAA
TATCGCTACCACCCCGATTTCCGTGCCATGCGCGAGGGCGAGAAATTCGACCAATGCCTGGCCTTCGGCGAATTGCTGCC
GCTGATCCGCAGGCGTGTCGAAGAGGATATCGAAGGCGCTAGCCCGACCCGCGAACGCGTGCTCGCCGCCGTGGTGCGGC
TGCTCGACATGGGCTTCGTGCGGATCGGGAACGAGATCTACAAGAAAACCAACAAGAGCTTCGGCGCCTCGACCCTGCGC
GATCGCCATGCGCGGATCGAAGGCAGCACGGTGCATATCCGCTTCGTCGGCAAGGGTGGCAAGGAGCGCGAACTGACGCT
CGAGGACGAAAAGCTCGCGCGCGCGGTCGAGGATGCGCGCGATGTCCCGGGCCAGCACCTGTTCCAGTATTACGACGCCG
ATGGCCAGCGTCACGAGATCGGCAGCGGCGATGTGAACGATTACCTGCGCGAAACGATGGGTGAGGAATTCTCGGCCAAG
AATTTCCGCACCTGGCATGCGAGCGTGCTGGGCTTCTCGCTACTCGAGCAAGCCAGGAAGCGCCCGGCCATGGGCGCGCT
ATTGGACGAAGTGTCGGAGAAGCTCGGCAATACGCCGACGGTAGCGCGCAACAGCTATATCCATCCGGCGATCATCGACG
TGCTCTCGCGCGACGAGGGCTGGGGCGAATTCCGCGAGAGCGTAACACTGCCGCGCTCCACCAAATATCTCACCCGCCAC
GAACGCGGCCTGATCGAAATGCTGCGGCGCGGGCCCAAGGCACAGGAATTGCTTGCCGCGTAG

Upstream 100 bases:

>100_bases
GCGTATGCTATCGATGCCAGCCGTCACCCCAGGCCGAAGGGCCGCGCAAGAATGTGCCCGACCGAAGGAACCGCGGAGGC
GGGTGGTCGGTTGACTCGCC

Downstream 100 bases:

>100_bases
TATCCTCTTGGGATACCGATCCGCCATGCATCAGGCAGGCGCCAAAATCCGCCGCTTTCGCGAAACCCACGATCCGCCGC
TTTCGGCGGAGGAGTTCGGT

Product: DNA topoisomerasei, putative

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MATHPDDLIYVDDSLPGISRKGAGRGFAYYDPKGRLIKCLKEKARLNAIALPPAYRDAWFCPAPNGHILATGYDDRGRKQ
YRYHPDFRAMREGEKFDQCLAFGELLPLIRRRVEEDIEGASPTRERVLAAVVRLLDMGFVRIGNEIYKKTNKSFGASTLR
DRHARIEGSTVHIRFVGKGGKERELTLEDEKLARAVEDARDVPGQHLFQYYDADGQRHEIGSGDVNDYLRETMGEEFSAK
NFRTWHASVLGFSLLEQARKRPAMGALLDEVSEKLGNTPTVARNSYIHPAIIDVLSRDEGWGEFRESVTLPRSTKYLTRH
ERGLIEMLRRGPKAQELLAA

Sequences:

>Translated_340_residues
MATHPDDLIYVDDSLPGISRKGAGRGFAYYDPKGRLIKCLKEKARLNAIALPPAYRDAWFCPAPNGHILATGYDDRGRKQ
YRYHPDFRAMREGEKFDQCLAFGELLPLIRRRVEEDIEGASPTRERVLAAVVRLLDMGFVRIGNEIYKKTNKSFGASTLR
DRHARIEGSTVHIRFVGKGGKERELTLEDEKLARAVEDARDVPGQHLFQYYDADGQRHEIGSGDVNDYLRETMGEEFSAK
NFRTWHASVLGFSLLEQARKRPAMGALLDEVSEKLGNTPTVARNSYIHPAIIDVLSRDEGWGEFRESVTLPRSTKYLTRH
ERGLIEMLRRGPKAQELLAA
>Mature_339_residues
ATHPDDLIYVDDSLPGISRKGAGRGFAYYDPKGRLIKCLKEKARLNAIALPPAYRDAWFCPAPNGHILATGYDDRGRKQY
RYHPDFRAMREGEKFDQCLAFGELLPLIRRRVEEDIEGASPTRERVLAAVVRLLDMGFVRIGNEIYKKTNKSFGASTLRD
RHARIEGSTVHIRFVGKGGKERELTLEDEKLARAVEDARDVPGQHLFQYYDADGQRHEIGSGDVNDYLRETMGEEFSAKN
FRTWHASVLGFSLLEQARKRPAMGALLDEVSEKLGNTPTVARNSYIHPAIIDVLSRDEGWGEFRESVTLPRSTKYLTRHE
RGLIEMLRRGPKAQELLAA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38559; Mature: 38428

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATHPDDLIYVDDSLPGISRKGAGRGFAYYDPKGRLIKCLKEKARLNAIALPPAYRDAWF
CCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCEEECCCCCCCCEE
CPAPNGHILATGYDDRGRKQYRYHPDFRAMREGEKFDQCLAFGELLPLIRRRVEEDIEGA
CCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPTRERVLAAVVRLLDMGFVRIGNEIYKKTNKSFGASTLRDRHARIEGSTVHIRFVGKGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCEEEEEEEECCC
KERELTLEDEKLARAVEDARDVPGQHLFQYYDADGQRHEIGSGDVNDYLRETMGEEFSAK
CCCCEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
NFRTWHASVLGFSLLEQARKRPAMGALLDEVSEKLGNTPTVARNSYIHPAIIDVLSRDEG
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC
WGEFRESVTLPRSTKYLTRHERGLIEMLRRGPKAQELLAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCC
>Mature Secondary Structure 
ATHPDDLIYVDDSLPGISRKGAGRGFAYYDPKGRLIKCLKEKARLNAIALPPAYRDAWF
CCCCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCEEECCCCCCCCEE
CPAPNGHILATGYDDRGRKQYRYHPDFRAMREGEKFDQCLAFGELLPLIRRRVEEDIEGA
CCCCCCCEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
SPTRERVLAAVVRLLDMGFVRIGNEIYKKTNKSFGASTLRDRHARIEGSTVHIRFVGKGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCEEEEEEEECCC
KERELTLEDEKLARAVEDARDVPGQHLFQYYDADGQRHEIGSGDVNDYLRETMGEEFSAK
CCCCEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
NFRTWHASVLGFSLLEQARKRPAMGALLDEVSEKLGNTPTVARNSYIHPAIIDVLSRDEG
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC
WGEFRESVTLPRSTKYLTRHERGLIEMLRRGPKAQELLAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA