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The map label for this gene is recJ [H]

Identifier: 85373913

GI number: 85373913

Start: 1129111

End: 1130874

Strand: Reverse

Name: recJ [H]

Synonym: ELI_05430

Alternate gene names: 85373913

Gene position: 1130874-1129111 (Counterclockwise)

Preceding gene: 85373916

Following gene: 85373912

Centisome position: 37.05

GC content: 66.33

Gene sequence:

>1764_bases
GTGTGCGGTGTCTCGCAATCCCTGTCCGGCAAGGCCTGGCGCTGGCGCGGCGGGAACATGGAGCTCGGCGATGGCGCGAT
CGGTCTGGAAGACGATATCGTCACCCAGTTGCTGCTTTCACGCGGCGTCGAGCGAGACGACCTGGAGCGGCATCGCGCAC
CGACGCTCAAGGCCTTCCTGCCCGATCCCTCGGTCTTTCAGGACATGGACAATGCCGCCGAACGCATTGCACAAGCGATC
CTCGCGCACGAGACGATCACTATCTACGGCGATTACGATGTCGACGGGGCGACGAGCTCGGCGCTGTTGATCCGCCTGAT
CCGCATGCTCGGGCACGAGGCCGGCCATTACATCCCGGACAGACTGCTCGAGGGCTATGGCCCGAGCGGCGAAGCGCTTG
TGAAGCTCGGCGAAAGCGGATCCAGCCTGATCGTCACAGTCGACTGCGGCGCGATGGCACACGAGGCGCTATCGATGGCG
CGCGACGCTGGCGTCGACGTAATCGTCGTCGATCACCACAAATGCCCGCCCGACCTTCCGCCGACCGTGGCATTGGTCAA
TCCCAATCGCCTGGACGAAAGCGATCTCGCGGCGAGCCATGGCCATCTCGCGGCGGTGGGCGTTGCGTTTCTCCTCGCGA
TCGCTTTAGTGCGCACCCTGCGCGAGCGCGGTTATTTCGACGATCGCCCCGAACCGGACTTACGCGGATTGCTGGACTTG
GTCGCGTTGGGCACAGTGGCCGATGTCGCTTCGCTGCACGGGCTCAACCGCGCCTTCGTTGCACAGGGTCTCAAGGTCAT
GGCCAAGCGCAACACGACCGGCATGAGCGCGCTGATCGACGCCAGCCGCCTGAAGCGCGCCCCCGCCTGCAGCGATCTTG
GATTCGCGCTCGGGCCGCGCATCAACGCGGGTGGACGGGTCGGCGAATCGACATTGGGCGTGCGCTTGCTGACGACCGAA
GATCCCGACGAGGCCCGCGAAATCGCCGAACAGCTCTCGCGCCTCAACGAGGAACGGCGCGCCATCGAATCAGAGGTTCA
GGAGGCCGCCGAAGAACAGCTTGCCGCACAGCACAACCGCGCCGTGCATGTGGTTGCCGGGCATGGCTGGCATCCGGGCG
TCATCGGGATCGTCGCCGGGCGGATCAAGGAAAAGACCGGCAAGCCCAGCCTCGTCATCGCGCTCGACGGCGAAAGCGCG
CAAGGCAAAGGCTCGGGCCGCTCCATCGCCGGGGTAGATCTGGGCGCAGCGATCATCGCTGCGCGCGAAAACGATCTGCT
GGTCGCCGGCGGCGGACATGCGATGGCGGCCGGCCTGACTGTGGATGCGGACAAGGTCGAGGCGCTGGCCGATTGGCTGG
AGGCGCGGCTCGAGGGTCCGGTGGGGCGCGCAATGGCGGAAAAGGCGATGACGCTTGATCTGGCGGTCGGGCCTCGCGGC
TTGACGCCAGAACTCGTCCATTCGCTGGACCGCGCAGGACCTTATGGCGTGGGCTGGCCCGGTCCGCGCGTTGCGGTCGG
GCCGGTCCATGTGATCAAGGCGGACATCGTCGGCAACGATCACCTCCGCTTGATCGCCGGATCAGTCGAAGGAGGTTCGC
TCAAGGCCATCGCCTTTCGCGCAGCCTCGACCGATTGGGGCCAGGCGCTGCTCCACAGCGCGCGCGGCCGCAGGCTCTGG
CTTGCAGGACGCGCCAGGATCGACGATTGGGGCGCGCGTCCGGCGGCCGAATTGCATCTCGAAGATGCGGCTTGGGCCGA
TTGA

Upstream 100 bases:

>100_bases
ACCTGCTCTTCCTTGGCTGGGTGAAAGTCAATGCTGCCCGCTTTGCGCACGCGGCCGTTGCGACTACCATTGCTCCATGG
CCTCCCGATCCCTCTCGCAT

Downstream 100 bases:

>100_bases
GGCGAATTCCTGCGTTCGATCTGCATTTGCGGGGTTGACCACGCGCAGAGCCGCCACTAGATGCGCGGCTCGCCTCCGGG
ATGGGCCATTTGGCCCGTTC

Product: single-stranded DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MCGVSQSLSGKAWRWRGGNMELGDGAIGLEDDIVTQLLLSRGVERDDLERHRAPTLKAFLPDPSVFQDMDNAAERIAQAI
LAHETITIYGDYDVDGATSSALLIRLIRMLGHEAGHYIPDRLLEGYGPSGEALVKLGESGSSLIVTVDCGAMAHEALSMA
RDAGVDVIVVDHHKCPPDLPPTVALVNPNRLDESDLAASHGHLAAVGVAFLLAIALVRTLRERGYFDDRPEPDLRGLLDL
VALGTVADVASLHGLNRAFVAQGLKVMAKRNTTGMSALIDASRLKRAPACSDLGFALGPRINAGGRVGESTLGVRLLTTE
DPDEAREIAEQLSRLNEERRAIESEVQEAAEEQLAAQHNRAVHVVAGHGWHPGVIGIVAGRIKEKTGKPSLVIALDGESA
QGKGSGRSIAGVDLGAAIIAARENDLLVAGGGHAMAAGLTVDADKVEALADWLEARLEGPVGRAMAEKAMTLDLAVGPRG
LTPELVHSLDRAGPYGVGWPGPRVAVGPVHVIKADIVGNDHLRLIAGSVEGGSLKAIAFRAASTDWGQALLHSARGRRLW
LAGRARIDDWGARPAAELHLEDAAWAD

Sequences:

>Translated_587_residues
MCGVSQSLSGKAWRWRGGNMELGDGAIGLEDDIVTQLLLSRGVERDDLERHRAPTLKAFLPDPSVFQDMDNAAERIAQAI
LAHETITIYGDYDVDGATSSALLIRLIRMLGHEAGHYIPDRLLEGYGPSGEALVKLGESGSSLIVTVDCGAMAHEALSMA
RDAGVDVIVVDHHKCPPDLPPTVALVNPNRLDESDLAASHGHLAAVGVAFLLAIALVRTLRERGYFDDRPEPDLRGLLDL
VALGTVADVASLHGLNRAFVAQGLKVMAKRNTTGMSALIDASRLKRAPACSDLGFALGPRINAGGRVGESTLGVRLLTTE
DPDEAREIAEQLSRLNEERRAIESEVQEAAEEQLAAQHNRAVHVVAGHGWHPGVIGIVAGRIKEKTGKPSLVIALDGESA
QGKGSGRSIAGVDLGAAIIAARENDLLVAGGGHAMAAGLTVDADKVEALADWLEARLEGPVGRAMAEKAMTLDLAVGPRG
LTPELVHSLDRAGPYGVGWPGPRVAVGPVHVIKADIVGNDHLRLIAGSVEGGSLKAIAFRAASTDWGQALLHSARGRRLW
LAGRARIDDWGARPAAELHLEDAAWAD
>Mature_587_residues
MCGVSQSLSGKAWRWRGGNMELGDGAIGLEDDIVTQLLLSRGVERDDLERHRAPTLKAFLPDPSVFQDMDNAAERIAQAI
LAHETITIYGDYDVDGATSSALLIRLIRMLGHEAGHYIPDRLLEGYGPSGEALVKLGESGSSLIVTVDCGAMAHEALSMA
RDAGVDVIVVDHHKCPPDLPPTVALVNPNRLDESDLAASHGHLAAVGVAFLLAIALVRTLRERGYFDDRPEPDLRGLLDL
VALGTVADVASLHGLNRAFVAQGLKVMAKRNTTGMSALIDASRLKRAPACSDLGFALGPRINAGGRVGESTLGVRLLTTE
DPDEAREIAEQLSRLNEERRAIESEVQEAAEEQLAAQHNRAVHVVAGHGWHPGVIGIVAGRIKEKTGKPSLVIALDGESA
QGKGSGRSIAGVDLGAAIIAARENDLLVAGGGHAMAAGLTVDADKVEALADWLEARLEGPVGRAMAEKAMTLDLAVGPRG
LTPELVHSLDRAGPYGVGWPGPRVAVGPVHVIKADIVGNDHLRLIAGSVEGGSLKAIAFRAASTDWGQALLHSARGRRLW
LAGRARIDDWGARPAAELHLEDAAWAD

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=537, Percent_Identity=37.0577281191806, Blast_Score=265, Evalue=8e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61963; Mature: 61963

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGVSQSLSGKAWRWRGGNMELGDGAIGLEDDIVTQLLLSRGVERDDLERHRAPTLKAFL
CCCCCCCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEC
PDPSVFQDMDNAAERIAQAILAHETITIYGDYDVDGATSSALLIRLIRMLGHEAGHYIPD
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHH
RLLEGYGPSGEALVKLGESGSSLIVTVDCGAMAHEALSMARDAGVDVIVVDHHKCPPDLP
HHHHCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
PTVALVNPNRLDESDLAASHGHLAAVGVAFLLAIALVRTLRERGYFDDRPEPDLRGLLDL
CEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VALGTVADVASLHGLNRAFVAQGLKVMAKRNTTGMSALIDASRLKRAPACSDLGFALGPR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC
INAGGRVGESTLGVRLLTTEDPDEAREIAEQLSRLNEERRAIESEVQEAAEEQLAAQHNR
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AVHVVAGHGWHPGVIGIVAGRIKEKTGKPSLVIALDGESAQGKGSGRSIAGVDLGAAIIA
EEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCEEEEE
ARENDLLVAGGGHAMAAGLTVDADKVEALADWLEARLEGPVGRAMAEKAMTLDLAVGPRG
ECCCCEEEECCCCEEEECEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCC
LTPELVHSLDRAGPYGVGWPGPRVAVGPVHVIKADIVGNDHLRLIAGSVEGGSLKAIAFR
CCHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEE
AASTDWGQALLHSARGRRLWLAGRARIDDWGARPAAELHLEDAAWAD
ECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MCGVSQSLSGKAWRWRGGNMELGDGAIGLEDDIVTQLLLSRGVERDDLERHRAPTLKAFL
CCCCCCCCCCCCEEEECCCEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEC
PDPSVFQDMDNAAERIAQAILAHETITIYGDYDVDGATSSALLIRLIRMLGHEAGHYIPD
CCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHH
RLLEGYGPSGEALVKLGESGSSLIVTVDCGAMAHEALSMARDAGVDVIVVDHHKCPPDLP
HHHHCCCCCCCEEEEECCCCCEEEEEEECCHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
PTVALVNPNRLDESDLAASHGHLAAVGVAFLLAIALVRTLRERGYFDDRPEPDLRGLLDL
CEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
VALGTVADVASLHGLNRAFVAQGLKVMAKRNTTGMSALIDASRLKRAPACSDLGFALGPR
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCC
INAGGRVGESTLGVRLLTTEDPDEAREIAEQLSRLNEERRAIESEVQEAAEEQLAAQHNR
CCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AVHVVAGHGWHPGVIGIVAGRIKEKTGKPSLVIALDGESAQGKGSGRSIAGVDLGAAIIA
EEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEECCCCCEEEEE
ARENDLLVAGGGHAMAAGLTVDADKVEALADWLEARLEGPVGRAMAEKAMTLDLAVGPRG
ECCCCEEEECCCCEEEECEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEEECCCC
LTPELVHSLDRAGPYGVGWPGPRVAVGPVHVIKADIVGNDHLRLIAGSVEGGSLKAIAFR
CCHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEE
AASTDWGQALLHSARGRRLWLAGRARIDDWGARPAAELHLEDAAWAD
ECCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]