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The map label for this gene is xerC [C]

Identifier: 85373664

GI number: 85373664

Start: 863700

End: 864338

Strand: Reverse

Name: xerC [C]

Synonym: ELI_04185

Alternate gene names: 85373664

Gene position: 864338-863700 (Counterclockwise)

Preceding gene: 85373671

Following gene: 85373659

Centisome position: 28.32

GC content: 54.46

Gene sequence:

>639_bases
ATGGAAATGACTTACTCACACTTTGACCCTGCTGCCCAAAATCGAGTGCCTTGGAACTTCGGAGCGAAGATTGGGCCCAA
GCGCCCGTTCAATCAGAAGCAGATCTGGGCGATCAGGTTCTTCCTTGATCGCGAAGAGCGCATCAGGGACCGGGCGCTCT
TCGATTTGGCGATTGATAGCAAGCTGCGAGGCTGTGATCTTGTCGAACTGAAGATCGGCGATCTGGTAAGCGGTCCAGAA
ATAAGGACACGGGCGACAATCACACAGCGCAAGACAGGCCGCCCTGTTCAGTTTGAGATTGCGGCAGACGCTCGCGCCAG
CCTTTTCGCCTGGCTGGAGCTCAGAGGTGGTGACGTCGAGGACTATGTCTTCCCTAGCCGTGTCGATCACTCGCGGCATC
TCAGCACACGACAATACGCTCGGCTAGTCGATGAGTGGGTTACGGCTATCGGCTTGCGACCCGAAGAATACGGCACTCAC
TCACTGCGCCGAACAAAGGCTTCGATAATCTACAAAGCCACAGGCAACATCCGGGCAATCCAGATATTGCTCGGTCACTC
CAAGATCGAAAACACAGTCCGATACCTAGGCGTCGACATAGAAGACGCTCTTACCCTTGCTGAGAAGACTGAAATCTGA

Upstream 100 bases:

>100_bases
CTCGGCTAGCGTCGACTTTGCGCCCCAATCTAGGACGTAGCGATCCGAGATCTTAGTTCCCGAAAGCGGACATTCCCTGC
GGCCATTCCGGCCAAGGAGA

Downstream 100 bases:

>100_bases
CTGGAGTTGGACGCTGGCCTAGACCTAGCCAGCGTCCGCTTCTGGGTGGTAAGCGGACATCGCTTCGTCGGGTATCGATC
GCAGAGGAGGTGCGATGAGC

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Site Specific Recombinase; Integrase; DNA Integration/Recombination/Inversion Protein; Prophage; Site-Specific Recombinase; Tyrosine Recombinase XerD; Recombinase/Integrase; Recombinase; Phage Integrase/Recombinase; Transposase; Fragmented Site-Specific Recombinase XerC/XerD; Site-Specific Recombinase Phage Integrase Family Protein; Phage Integrase Protein; Truncated Site-Specific Recombinase; DNA Integration/Recombination/Invertion Protein; Bacteriophage Integrase

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MEMTYSHFDPAAQNRVPWNFGAKIGPKRPFNQKQIWAIRFFLDREERIRDRALFDLAIDSKLRGCDLVELKIGDLVSGPE
IRTRATITQRKTGRPVQFEIAADARASLFAWLELRGGDVEDYVFPSRVDHSRHLSTRQYARLVDEWVTAIGLRPEEYGTH
SLRRTKASIIYKATGNIRAIQILLGHSKIENTVRYLGVDIEDALTLAEKTEI

Sequences:

>Translated_212_residues
MEMTYSHFDPAAQNRVPWNFGAKIGPKRPFNQKQIWAIRFFLDREERIRDRALFDLAIDSKLRGCDLVELKIGDLVSGPE
IRTRATITQRKTGRPVQFEIAADARASLFAWLELRGGDVEDYVFPSRVDHSRHLSTRQYARLVDEWVTAIGLRPEEYGTH
SLRRTKASIIYKATGNIRAIQILLGHSKIENTVRYLGVDIEDALTLAEKTEI
>Mature_212_residues
MEMTYSHFDPAAQNRVPWNFGAKIGPKRPFNQKQIWAIRFFLDREERIRDRALFDLAIDSKLRGCDLVELKIGDLVSGPE
IRTRATITQRKTGRPVQFEIAADARASLFAWLELRGGDVEDYVFPSRVDHSRHLSTRQYARLVDEWVTAIGLRPEEYGTH
SLRRTKASIIYKATGNIRAIQILLGHSKIENTVRYLGVDIEDALTLAEKTEI

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24339; Mature: 24339

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMTYSHFDPAAQNRVPWNFGAKIGPKRPFNQKQIWAIRFFLDREERIRDRALFDLAIDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHEECC
KLRGCDLVELKIGDLVSGPEIRTRATITQRKTGRPVQFEIAADARASLFAWLELRGGDVE
CCCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
DYVFPSRVDHSRHLSTRQYARLVDEWVTAIGLRPEEYGTHSLRRTKASIIYKATGNIRAI
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHEEEEEEECCCEEEE
QILLGHSKIENTVRYLGVDIEDALTLAEKTEI
EEEECCHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEMTYSHFDPAAQNRVPWNFGAKIGPKRPFNQKQIWAIRFFLDREERIRDRALFDLAIDS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHEECC
KLRGCDLVELKIGDLVSGPEIRTRATITQRKTGRPVQFEIAADARASLFAWLELRGGDVE
CCCCCCEEEEEECCCCCCCCCEEEEEEHHCCCCCCEEEEEECCCCCEEEEEEEECCCCCC
DYVFPSRVDHSRHLSTRQYARLVDEWVTAIGLRPEEYGTHSLRRTKASIIYKATGNIRAI
CCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHEEEEEEECCCEEEE
QILLGHSKIENTVRYLGVDIEDALTLAEKTEI
EEEECCHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA