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The map label for this gene is nusB [H]

Identifier: 85373345

GI number: 85373345

Start: 560341

End: 560718

Strand: Reverse

Name: nusB [H]

Synonym: ELI_02590

Alternate gene names: 85373345

Gene position: 560718-560341 (Counterclockwise)

Preceding gene: 85373346

Following gene: 85373344

Centisome position: 18.37

GC content: 62.43

Gene sequence:

>378_bases
ATGGAAAAAACGCCGCTCGCCAGGCTGCTCGACGAGTTCCACCAGCATCGCCTCGGGCGCGAGATCGAGGATGGCGAGCA
CTATGCCGATGCCGAAGTCGATTTCTTCGACGATATCGTGAGCGGCGTCGATGCGCGCAGTGACGAGATCGATGAGCTGG
TGACCGCCAAGCTGGCCGCAGGATGGACGCTGGCCCGGCTGGACAAAACCATGGTGCAGATCCTGCGCGCCGGGACCTAC
GAACTCATCGCCCGTGCCGATGTCCCGAAGGCCGCCGCGATCAGCGAGTATGTCGATGTGGCCAAGGCCTTCTTCGACGA
TCGCGAAGCGAAGTTCGTCAATGGCCTACTCGACGCGGTCGCCAAACAGGTGCGGTGA

Upstream 100 bases:

>100_bases
ATGCCGCCTCGATAGAATTGCGACTGAAGACATGAACCAGCGTTCTCAATCACGCTCCGCCGCGCGGCTCGCCGCCGTCC
AGGCGCTGTACCAGCGTCAC

Downstream 100 bases:

>100_bases
CCAACGAGTTCGACTTCATCGCGCGATTGCGCGCGCTGGCCACCGATCCGGCGGCGCGGGGCCTCAACGACGACGCGGCG
GTGCTGGAAATCGGCGGGCA

Product: transcription termination factor

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEKTPLARLLDEFHQHRLGREIEDGEHYADAEVDFFDDIVSGVDARSDEIDELVTAKLAAGWTLARLDKTMVQILRAGTY
ELIARADVPKAAAISEYVDVAKAFFDDREAKFVNGLLDAVAKQVR

Sequences:

>Translated_125_residues
MEKTPLARLLDEFHQHRLGREIEDGEHYADAEVDFFDDIVSGVDARSDEIDELVTAKLAAGWTLARLDKTMVQILRAGTY
ELIARADVPKAAAISEYVDVAKAFFDDREAKFVNGLLDAVAKQVR
>Mature_125_residues
MEKTPLARLLDEFHQHRLGREIEDGEHYADAEVDFFDDIVSGVDARSDEIDELVTAKLAAGWTLARLDKTMVQILRAGTY
ELIARADVPKAAAISEYVDVAKAFFDDREAKFVNGLLDAVAKQVR

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 13980; Mature: 13980

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTPLARLLDEFHQHRLGREIEDGEHYADAEVDFFDDIVSGVDARSDEIDELVTAKLAA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GWTLARLDKTMVQILRAGTYELIARADVPKAAAISEYVDVAKAFFDDREAKFVNGLLDAV
CHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AKQVR
HHHCC
>Mature Secondary Structure
MEKTPLARLLDEFHQHRLGREIEDGEHYADAEVDFFDDIVSGVDARSDEIDELVTAKLAA
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
GWTLARLDKTMVQILRAGTYELIARADVPKAAAISEYVDVAKAFFDDREAKFVNGLLDAV
CHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AKQVR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA