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The map label for this gene is yicJ [C]

Identifier: 85372885

GI number: 85372885

Start: 79066

End: 80559

Strand: Direct

Name: yicJ [C]

Synonym: ELI_00290

Alternate gene names: 85372885

Gene position: 79066-80559 (Clockwise)

Preceding gene: 85372883

Following gene: 85372886

Centisome position: 2.59

GC content: 62.65

Gene sequence:

>1494_bases
TTGACCGACATCAGCGCAACTGGATTGCCGCCGCTGCCTACGCGCACGCGGTGGCTCTATGGCACGGGCCTGATGGCGAG
CGGTATCAAGACCACCGCTTTCAGCACCTATCTGCTGCTCTATTTCAACCAGGTCCTCGGCGTCCCGGTCGACATCGTCT
CGCAGGCGATTTTCCTTACCCTGCTCATCGATGCCATTGCCGATCCGCTGATCGGCCGGTGGAGCGACCGGACGAGAAGC
AGGCTGGGTCGGCGCCATCCCTTCTTGTTCGCCGCCGCTGTTCCGGCCGGCCTGTTCTTCGCCGCCACCTGGTTTCCGCC
CGATGGTCTGTCCGATTTCGGGATGGGCGTCTGGGTGTTCTGCCTCGCCAGCCTGACCCGCGCCTGCATGAGCCTGTTCG
AGATACCTTCGAGCGCGCTCGGGGCAGAGCTGACCGACGACTACACCGAGCGCACCCGTATCTTTGCGCTGCGGTTCTGG
TTCGGCTATATCGGCGCCTTCGGGTTCGGGGCTTTCTGCCTCGCGGTCTTCTTCGCCGAAACGCCCGAATACCCGCGCGG
CCAGCTCAATCCGGAGGGCTATGTCGGCTTCGCGATTACGGGCGGCATCCTCATCGCCCTGGCGGTGCTGACCTGTGCGT
TCGGCACCAGGAGCCGCATTCCCTACCTCAGGCAGGTGCGCGAGCGTGCCAGCAAGCTTTCGCCGATGGATCACTTGCGG
GAAATGGGATCGGCCTTCGCGCACCGCCCCTTCCTTGCCATTTTCGGCTATTCGCTGTCGAAGCAGGTCGCGATCGGCAT
GTATGTATCGAGCACGATCTACTTCAATACCTTCATCTTCGGCTTGAATGCCGGTCAACTTGCGATCCTGACGGTCGAGC
AGCTGGTGGCGGCGACATGCGCGGTGCCGCTCGCGCCGATCCTCGCCCGCAAGATGGGCAAGCGCAATGCGGCGATGGCG
ATGGGCTTCGGCGGGATCTGCATCGGTGTGATGCCGCTGATCCTGACCTTCTTCGGCCTGTTCTATCCCAAAGGCGATCC
GATGCTGCTGCCCGCGCTCTTCATCGTCGGTGCGATCTATCACACGATGATCGCGACCTCGCTGATGAATTCCTCCGGCA
TGATCGCGGACACAATCGAGGATTTTGCGGTGAAGAGCGACCGGCATAATGCGGGCGTCTTCTTCTCCGTCAACAGCTTT
ACCACCCAGGCCTCTGCCGGGCTCGGCATCCTGATGTCGGGCATCGTGCTGCAGGCCGCGAATTTTCCGGAGGATGCCGA
CCCGCTCGGAGTCAGCCAGGCGATCAGCAACAGCCTGATTGTCTGGTACGTGCCTCTGGTCGTCGGCCTTTGGGCGATCG
GCACGTTCCTGCTGCTGTTCTACCCGATCACGGAGGCATCGCATCGCGCCAACGTCGAAAAACTGGCGGCGCGCGAAGCG
AGGCTAAATGCGCAGACCGTGCGCGATTCGCCTGAAGCCGGATCGCCCGGCTGA

Upstream 100 bases:

>100_bases
CATCGCTAAAGCAATTCGCACGCCTCTCGACAAGCGGCCTTGTGCTGGCGGCGCAACCCGTTAGGCTCCCGAACTGGAGA
GAGAAAAAGGCCCCCGCCAT

Downstream 100 bases:

>100_bases
CGCCTTCCGCTACGTCAGCATGGACCACAGGCCCCCTGTTCTCGGCCCTTTGACTCGTGCATAGGTGGCAAAACAAGACT
CATAAGCAGGAGAGAAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTDISATGLPPLPTRTRWLYGTGLMASGIKTTAFSTYLLLYFNQVLGVPVDIVSQAIFLTLLIDAIADPLIGRWSDRTRS
RLGRRHPFLFAAAVPAGLFFAATWFPPDGLSDFGMGVWVFCLASLTRACMSLFEIPSSALGAELTDDYTERTRIFALRFW
FGYIGAFGFGAFCLAVFFAETPEYPRGQLNPEGYVGFAITGGILIALAVLTCAFGTRSRIPYLRQVRERASKLSPMDHLR
EMGSAFAHRPFLAIFGYSLSKQVAIGMYVSSTIYFNTFIFGLNAGQLAILTVEQLVAATCAVPLAPILARKMGKRNAAMA
MGFGGICIGVMPLILTFFGLFYPKGDPMLLPALFIVGAIYHTMIATSLMNSSGMIADTIEDFAVKSDRHNAGVFFSVNSF
TTQASAGLGILMSGIVLQAANFPEDADPLGVSQAISNSLIVWYVPLVVGLWAIGTFLLLFYPITEASHRANVEKLAAREA
RLNAQTVRDSPEAGSPG

Sequences:

>Translated_497_residues
MTDISATGLPPLPTRTRWLYGTGLMASGIKTTAFSTYLLLYFNQVLGVPVDIVSQAIFLTLLIDAIADPLIGRWSDRTRS
RLGRRHPFLFAAAVPAGLFFAATWFPPDGLSDFGMGVWVFCLASLTRACMSLFEIPSSALGAELTDDYTERTRIFALRFW
FGYIGAFGFGAFCLAVFFAETPEYPRGQLNPEGYVGFAITGGILIALAVLTCAFGTRSRIPYLRQVRERASKLSPMDHLR
EMGSAFAHRPFLAIFGYSLSKQVAIGMYVSSTIYFNTFIFGLNAGQLAILTVEQLVAATCAVPLAPILARKMGKRNAAMA
MGFGGICIGVMPLILTFFGLFYPKGDPMLLPALFIVGAIYHTMIATSLMNSSGMIADTIEDFAVKSDRHNAGVFFSVNSF
TTQASAGLGILMSGIVLQAANFPEDADPLGVSQAISNSLIVWYVPLVVGLWAIGTFLLLFYPITEASHRANVEKLAAREA
RLNAQTVRDSPEAGSPG
>Mature_496_residues
TDISATGLPPLPTRTRWLYGTGLMASGIKTTAFSTYLLLYFNQVLGVPVDIVSQAIFLTLLIDAIADPLIGRWSDRTRSR
LGRRHPFLFAAAVPAGLFFAATWFPPDGLSDFGMGVWVFCLASLTRACMSLFEIPSSALGAELTDDYTERTRIFALRFWF
GYIGAFGFGAFCLAVFFAETPEYPRGQLNPEGYVGFAITGGILIALAVLTCAFGTRSRIPYLRQVRERASKLSPMDHLRE
MGSAFAHRPFLAIFGYSLSKQVAIGMYVSSTIYFNTFIFGLNAGQLAILTVEQLVAATCAVPLAPILARKMGKRNAAMAM
GFGGICIGVMPLILTFFGLFYPKGDPMLLPALFIVGAIYHTMIATSLMNSSGMIADTIEDFAVKSDRHNAGVFFSVNSFT
TQASAGLGILMSGIVLQAANFPEDADPLGVSQAISNSLIVWYVPLVVGLWAIGTFLLLFYPITEASHRANVEKLAAREAR
LNAQTVRDSPEAGSPG

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Homo sapiens, GI122937339, Length=481, Percent_Identity=24.1164241164241, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87082306, Length=299, Percent_Identity=25.752508361204, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786466, Length=490, Percent_Identity=22.4489795918367, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787902, Length=486, Percent_Identity=22.2222222222222, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53797; Mature: 53666

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDISATGLPPLPTRTRWLYGTGLMASGIKTTAFSTYLLLYFNQVLGVPVDIVSQAIFLT
CCCCCCCCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLIDAIADPLIGRWSDRTRSRLGRRHPFLFAAAVPAGLFFAATWFPPDGLSDFGMGVWVF
HHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHEEECCCCCCCCHHHHHHHHH
CLASLTRACMSLFEIPSSALGAELTDDYTERTRIFALRFWFGYIGAFGFGAFCLAVFFAE
HHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPEYPRGQLNPEGYVGFAITGGILIALAVLTCAFGTRSRIPYLRQVRERASKLSPMDHLR
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
EMGSAFAHRPFLAIFGYSLSKQVAIGMYVSSTIYFNTFIFGLNAGQLAILTVEQLVAATC
HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHEEHHHEEECCCCCEEEHHHHHHHHHHH
AVPLAPILARKMGKRNAAMAMGFGGICIGVMPLILTFFGLFYPKGDPMLLPALFIVGAIY
HHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
HTMIATSLMNSSGMIADTIEDFAVKSDRHNAGVFFSVNSFTTQASAGLGILMSGIVLQAA
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHC
NFPEDADPLGVSQAISNSLIVWYVPLVVGLWAIGTFLLLFYPITEASHRANVEKLAAREA
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLNAQTVRDSPEAGSPG
HCCHHHHCCCCCCCCCC
>Mature Secondary Structure 
TDISATGLPPLPTRTRWLYGTGLMASGIKTTAFSTYLLLYFNQVLGVPVDIVSQAIFLT
CCCCCCCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLIDAIADPLIGRWSDRTRSRLGRRHPFLFAAAVPAGLFFAATWFPPDGLSDFGMGVWVF
HHHHHHHHHHHCCCCHHHHHHHCCCCCEEEEHHHHHHHHHEEECCCCCCCCHHHHHHHHH
CLASLTRACMSLFEIPSSALGAELTDDYTERTRIFALRFWFGYIGAFGFGAFCLAVFFAE
HHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TPEYPRGQLNPEGYVGFAITGGILIALAVLTCAFGTRSRIPYLRQVRERASKLSPMDHLR
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHH
EMGSAFAHRPFLAIFGYSLSKQVAIGMYVSSTIYFNTFIFGLNAGQLAILTVEQLVAATC
HHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHEEHHHEEECCCCCEEEHHHHHHHHHHH
AVPLAPILARKMGKRNAAMAMGFGGICIGVMPLILTFFGLFYPKGDPMLLPALFIVGAIY
HHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
HTMIATSLMNSSGMIADTIEDFAVKSDRHNAGVFFSVNSFTTQASAGLGILMSGIVLQAA
HHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHC
NFPEDADPLGVSQAISNSLIVWYVPLVVGLWAIGTFLLLFYPITEASHRANVEKLAAREA
CCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
RLNAQTVRDSPEAGSPG
HCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]