| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is ilvE [H]
Identifier: 85060373
GI number: 85060373
Start: 4104606
End: 4105535
Strand: Reverse
Name: ilvE [H]
Synonym: SG2395
Alternate gene names: 85060373
Gene position: 4105535-4104606 (Counterclockwise)
Preceding gene: 85060374
Following gene: 85060372
Centisome position: 98.43
GC content: 56.34
Gene sequence:
>930_bases ATGACAACGAAGAAAGCTGATTTCATTTGGTTTAACGGTGAAATGGTTCCGTGGGCAGAAGCCAAAGTCCATGTAATGTC GCATGCGCTGCATTACGGGTCATCAGTCTTTGAAGGTGTACGTTGCTACGATTCGCATAAAGGCCCGGTGGTATTTCGTC ATCGTGAACACATGCAGCGCCTACACAACTCGGCCAAAATCTATCGCATGCCGGTCACGCAAAGTGTCGATGAGCTTATG GCGGCCACGCGCGCCGTTATACTGAAAAATAACCTGGTCAGCGCCTACATCCGACCGCTGGTGTTTGTCGGAGATGTCGG CATGGGCGTTAACCCGCCGGCGGGCTATACCACCGACGTCATTATCGCCGCGTTCCCCTGGGGCGCTTATCTGGGCGAAG AAGCCCTGGATCAGGGGATCGACGCGATGGTGTCTTCGTGGAACCGCGCGGCGGCCAATACTATCCCTACCGCGGTCAAA GCCGGCGGCAATTACCTGTCTTCAATGCTGGTGGGCAGCGAAGCCCGCCGCCATGGTTATCAAGAGGGTATCGCGCTGGA CGTACATGGTTATGTCTCCGAAGGTGCCGGCGAGAATTTGTTTGAAGTGAAGGACGGTATTTTGTTTACGCCGCCGTTCA CCTCATCCGCGCTGCCCGGCATTACGCGCGACGCCATTATCAAGCTGGCCATCGCGGCCGGGCTGGAAGTGCGGGAACAG GTCTTGTCCCGTGAGTCCCTCTATTTGGCCGACGAAGTCTTTATGTCCGGTACCGCCGCCGAGATTACCCCGGTGCGCAG CGTTGACGGCATCAAAGTCGGCATCGGTAAATGCGGCCCGGTGACCAAGCAATTGCAGCAGGCGTTCTTCGGCTTGTTTA CCGGCGAGACTGAAGATAAATGGGGCTGGCTGGATCCGGTCAATCAATAA
Upstream 100 bases:
>100_bases TCTGCACAATTAAGCAAACTAATGGATGTTTCCTGTGTCGAGATCCAGCAATTAACAACACAAAAAATACGTGCCTAAGG CCGGGTAAGGAAAGAAAAAA
Downstream 100 bases:
>100_bases CGATAACGCTTTCGTGCCGCGGCGCTGCGGCTGCCCTGGCCATCTGAATAACTGGAGTTATGAGCATGCCTAAGTACCGT TCCGCTACCACCACGCACGG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MTTKKADFIWFNGEMVPWAEAKVHVMSHALHYGSSVFEGVRCYDSHKGPVVFRHREHMQRLHNSAKIYRMPVTQSVDELM AATRAVILKNNLVSAYIRPLVFVGDVGMGVNPPAGYTTDVIIAAFPWGAYLGEEALDQGIDAMVSSWNRAAANTIPTAVK AGGNYLSSMLVGSEARRHGYQEGIALDVHGYVSEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAIAAGLEVREQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIKVGIGKCGPVTKQLQQAFFGLFTGETEDKWGWLDPVNQ
Sequences:
>Translated_309_residues MTTKKADFIWFNGEMVPWAEAKVHVMSHALHYGSSVFEGVRCYDSHKGPVVFRHREHMQRLHNSAKIYRMPVTQSVDELM AATRAVILKNNLVSAYIRPLVFVGDVGMGVNPPAGYTTDVIIAAFPWGAYLGEEALDQGIDAMVSSWNRAAANTIPTAVK AGGNYLSSMLVGSEARRHGYQEGIALDVHGYVSEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAIAAGLEVREQ VLSRESLYLADEVFMSGTAAEITPVRSVDGIKVGIGKCGPVTKQLQQAFFGLFTGETEDKWGWLDPVNQ >Mature_308_residues TTKKADFIWFNGEMVPWAEAKVHVMSHALHYGSSVFEGVRCYDSHKGPVVFRHREHMQRLHNSAKIYRMPVTQSVDELMA ATRAVILKNNLVSAYIRPLVFVGDVGMGVNPPAGYTTDVIIAAFPWGAYLGEEALDQGIDAMVSSWNRAAANTIPTAVKA GGNYLSSMLVGSEARRHGYQEGIALDVHGYVSEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAIAAGLEVREQV LSRESLYLADEVFMSGTAAEITPVRSVDGIKVGIGKCGPVTKQLQQAFFGLFTGETEDKWGWLDPVNQ
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=283, Percent_Identity=27.208480565371, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI38176287, Length=287, Percent_Identity=27.8745644599303, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI296010906, Length=287, Percent_Identity=27.8745644599303, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI296010904, Length=287, Percent_Identity=27.8745644599303, Blast_Score=85, Evalue=7e-17, Organism=Escherichia coli, GI48994963, Length=309, Percent_Identity=88.673139158576, Blast_Score=581, Evalue=1e-167, Organism=Caenorhabditis elegans, GI17565728, Length=287, Percent_Identity=29.2682926829268, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17568601, Length=282, Percent_Identity=28.0141843971631, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6322608, Length=324, Percent_Identity=25.9259259259259, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322002, Length=313, Percent_Identity=25.5591054313099, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI24641779, Length=286, Percent_Identity=25.8741258741259, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 33650; Mature: 33519
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKADFIWFNGEMVPWAEAKVHVMSHALHYGSSVFEGVRCYDSHKGPVVFRHREHMQR CCCCCCCEEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH LHNSAKIYRMPVTQSVDELMAATRAVILKNNLVSAYIRPLVFVGDVGMGVNPPAGYTTDV HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCE IIAAFPWGAYLGEEALDQGIDAMVSSWNRAAANTIPTAVKAGGNYLSSMLVGSEARRHGY EEEECCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCH QEGIALDVHGYVSEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAIAAGLEVREQ HCCEEEEEECHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH VLSRESLYLADEVFMSGTAAEITPVRSVDGIKVGIGKCGPVTKQLQQAFFGLFTGETEDK HHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCC WGWLDPVNQ CCCCCCCCC >Mature Secondary Structure TTKKADFIWFNGEMVPWAEAKVHVMSHALHYGSSVFEGVRCYDSHKGPVVFRHREHMQR CCCCCCEEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH LHNSAKIYRMPVTQSVDELMAATRAVILKNNLVSAYIRPLVFVGDVGMGVNPPAGYTTDV HHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCE IIAAFPWGAYLGEEALDQGIDAMVSSWNRAAANTIPTAVKAGGNYLSSMLVGSEARRHGY EEEECCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHCCH QEGIALDVHGYVSEGAGENLFEVKDGILFTPPFTSSALPGITRDAIIKLAIAAGLEVREQ HCCEEEEEECHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHH VLSRESLYLADEVFMSGTAAEITPVRSVDGIKVGIGKCGPVTKQLQQAFFGLFTGETEDK HHHHHHHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCC WGWLDPVNQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]