| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is wzxE [H]
Identifier: 85060355
GI number: 85060355
Start: 4081359
End: 4082609
Strand: Reverse
Name: wzxE [H]
Synonym: SG2377
Alternate gene names: 85060355
Gene position: 4082609-4081359 (Counterclockwise)
Preceding gene: 85060356
Following gene: 85060354
Centisome position: 97.88
GC content: 61.39
Gene sequence:
>1251_bases ATGCCGCTGGTGAACGCCTCGGTCTGGACTGCACTGTCCACGCTGATTAAAATCGGCGCCGGCCTGCTGGTAGTAAAAGT GTTAGCGGTGGCCTTTGGCCCCGACGGCGTGGGGCAGGTGGGGAATTACCGCCAGTTGGTCACGGTGCTGGGCGTGTTGT CCGGCGCCGGCATCTTCAACGGTATGACCAAATTGGTGGCGGAGCACCAGCATCAGCCGGAGCAGCTGCGCGCGGCGTTG GGCACCGGTTCGGCGATGGTCCTCGGCTCCTCGCTGCTGCTGGCGGCCGTGTTCATCTTTGCCGCTGATCCGGTCAGCCG CGCACTGTTCGGCCACGAGCGATATCGGGGCGCCATTGTTGCGTTGGCGGTGATCCAGCTTGGCATCGCCTGCGCCAATC TGGGGCTGGCTATCTTGAAAGGATACCGCGACGCCGCCGGCAATGCCCTTGCCGTCAGCGCCGGCAGTCTGCTCGGCGTC GCGGCCTTCTTCGCCTGCTATCGCCTGGGTGGTTATGCGGGGGCGTTGGCCGGATTGGCGCTGCTGCCGGCGATGGCGCT GTTGCCGGTAGTGTTCATGTTGTGGTACCGGCGTCGACTGCCGCTGTCATTCTTGTTGCCCGCCTGGGACAGCGGCTATG CCGCCTTGTTGAGCAAGTTCACCGTTATGGCGCTCATTACCGCGGTCACGCTGCCGGTGGCCTATGTGATGATGCGGAAT TTACTGGCGCGCAGCGAGGGGTGGGCGGCGGTGGGGATCTGGCAGGGCGTCAGCAGTATCTCGGACGCCTATTTGCAGTT TATCACCGCCTCGTTTACCGTTTATTTATTGCCCACGCTTTCGCGATTAACCGATAAACGGGCGGTGGCACGGGAAATCG CGTGCGCGCTGCGGTTTGTCTTGCCGGCGGTGGCGGCGGTCAGTCTGGCGCTTTGGCGGCTGCGCGATGTGGCGATACGG ATTTTGTTTTCCGCCGAATTCAGCGCGATGAGCGGCTTATTTGCCTGGCAACTGGTGGGGGATGTTCTTAAAGTGGGCGC CTATGTTTTTGGCTATCTGGTGGTGGCCCGGGCGGCGCTGCGAGTCTATTTATTGGCTGAAATCACCCAGTTTGTCCTGC TGACCGGGTTTTCCCACTGGCTTATTCCGCGTCACGGCGCGCTGGGCGCGACCCAGGCCTATATGGCCACCTATATCGTC TATTTCGCGCTGTGCGGCGGTTTGTTCTTACTCTATCTTAGGAAAAAATGA
Upstream 100 bases:
>100_bases AGCGAAAGCCGACGCCTGGTGCGTCTACCGCTGTTTTATAATCTGAGCGACGACGATCAGCAACGCGTCATCGACGCGAT ACACGGCTACTACCGCTGAT
Downstream 100 bases:
>100_bases GTAATTTGATCCATGTGCTGGGTTCCGATATCCCGCATCATAATGTGACGGTGTTGCGTTTCTTTAACGATACGCTGGCG GCAATTTGCCCGCCGGCGCA
Product: putative lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MPLVNASVWTALSTLIKIGAGLLVVKVLAVAFGPDGVGQVGNYRQLVTVLGVLSGAGIFNGMTKLVAEHQHQPEQLRAAL GTGSAMVLGSSLLLAAVFIFAADPVSRALFGHERYRGAIVALAVIQLGIACANLGLAILKGYRDAAGNALAVSAGSLLGV AAFFACYRLGGYAGALAGLALLPAMALLPVVFMLWYRRRLPLSFLLPAWDSGYAALLSKFTVMALITAVTLPVAYVMMRN LLARSEGWAAVGIWQGVSSISDAYLQFITASFTVYLLPTLSRLTDKRAVAREIACALRFVLPAVAAVSLALWRLRDVAIR ILFSAEFSAMSGLFAWQLVGDVLKVGAYVFGYLVVARAALRVYLLAEITQFVLLTGFSHWLIPRHGALGATQAYMATYIV YFALCGGLFLLYLRKK
Sequences:
>Translated_416_residues MPLVNASVWTALSTLIKIGAGLLVVKVLAVAFGPDGVGQVGNYRQLVTVLGVLSGAGIFNGMTKLVAEHQHQPEQLRAAL GTGSAMVLGSSLLLAAVFIFAADPVSRALFGHERYRGAIVALAVIQLGIACANLGLAILKGYRDAAGNALAVSAGSLLGV AAFFACYRLGGYAGALAGLALLPAMALLPVVFMLWYRRRLPLSFLLPAWDSGYAALLSKFTVMALITAVTLPVAYVMMRN LLARSEGWAAVGIWQGVSSISDAYLQFITASFTVYLLPTLSRLTDKRAVAREIACALRFVLPAVAAVSLALWRLRDVAIR ILFSAEFSAMSGLFAWQLVGDVLKVGAYVFGYLVVARAALRVYLLAEITQFVLLTGFSHWLIPRHGALGATQAYMATYIV YFALCGGLFLLYLRKK >Mature_415_residues PLVNASVWTALSTLIKIGAGLLVVKVLAVAFGPDGVGQVGNYRQLVTVLGVLSGAGIFNGMTKLVAEHQHQPEQLRAALG TGSAMVLGSSLLLAAVFIFAADPVSRALFGHERYRGAIVALAVIQLGIACANLGLAILKGYRDAAGNALAVSAGSLLGVA AFFACYRLGGYAGALAGLALLPAMALLPVVFMLWYRRRLPLSFLLPAWDSGYAALLSKFTVMALITAVTLPVAYVMMRNL LARSEGWAAVGIWQGVSSISDAYLQFITASFTVYLLPTLSRLTDKRAVAREIACALRFVLPAVAAVSLALWRLRDVAIRI LFSAEFSAMSGLFAWQLVGDVLKVGAYVFGYLVVARAALRVYLLAEITQFVLLTGFSHWLIPRHGALGATQAYMATYIVY FALCGGLFLLYLRKK
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=415, Percent_Identity=65.7831325301205, Blast_Score=544, Evalue=1e-156,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 44356; Mature: 44225
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVNASVWTALSTLIKIGAGLLVVKVLAVAFGPDGVGQVGNYRQLVTVLGVLSGAGIFN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHH GMTKLVAEHQHQPEQLRAALGTGSAMVLGSSLLLAAVFIFAADPVSRALFGHERYRGAIV HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALAVIQLGIACANLGLAILKGYRDAAGNALAVSAGSLLGVAAFFACYRLGGYAGALAGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHH LLPAMALLPVVFMLWYRRRLPLSFLLPAWDSGYAALLSKFTVMALITAVTLPVAYVMMRN HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLARSEGWAAVGIWQGVSSISDAYLQFITASFTVYLLPTLSRLTDKRAVAREIACALRFV HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAVAAVSLALWRLRDVAIRILFSAEFSAMSGLFAWQLVGDVLKVGAYVFGYLVVARAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVYLLAEITQFVLLTGFSHWLIPRHGALGATQAYMATYIVYFALCGGLFLLYLRKK HHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLVNASVWTALSTLIKIGAGLLVVKVLAVAFGPDGVGQVGNYRQLVTVLGVLSGAGIFN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHH GMTKLVAEHQHQPEQLRAALGTGSAMVLGSSLLLAAVFIFAADPVSRALFGHERYRGAIV HHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ALAVIQLGIACANLGLAILKGYRDAAGNALAVSAGSLLGVAAFFACYRLGGYAGALAGLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHH LLPAMALLPVVFMLWYRRRLPLSFLLPAWDSGYAALLSKFTVMALITAVTLPVAYVMMRN HHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLARSEGWAAVGIWQGVSSISDAYLQFITASFTVYLLPTLSRLTDKRAVAREIACALRFV HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPAVAAVSLALWRLRDVAIRILFSAEFSAMSGLFAWQLVGDVLKVGAYVFGYLVVARAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVYLLAEITQFVLLTGFSHWLIPRHGALGATQAYMATYIVYFALCGGLFLLYLRKK HHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]