| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is pyrE
Identifier: 85060190
GI number: 85060190
Start: 3843338
End: 3843979
Strand: Reverse
Name: pyrE
Synonym: SG2212
Alternate gene names: 85060190
Gene position: 3843979-3843338 (Counterclockwise)
Preceding gene: 85060191
Following gene: 85060186
Centisome position: 92.16
GC content: 53.74
Gene sequence:
>642_bases GTGAAAGAGTACCAGAGTAAATTTATCGAGTATGCATTAAACAAACAGGTATTAAAATTCGGCGAATTTACGCTTAAATC CGGCCGTATCAGCCCCTATTTTTTTAATGCCGGTTTGTTTAACACCGGTCGCGATCTGGCTTTCCTGGGGCGGGTTTACG CCGCGGCGCTGATGGATTCCGGCGTGCGTTTCGATGTGTTATTCGGGCCGGCCTACAAGGGGATTCCCATTGCGACGACC ACCGCGGTGGCACTGGCTGAGCAACATCAACGGGACGTTCCCTACTGTTTTAATCGCAAGGAAGCGAAGGACCACGGCGA AGGCGGTACGCTGGTCGGCAGCCCGCTTCAGGGTAAAGTGATGCTGGTGGATGATGTTATCACCGCGGGTACCGCTATTC GCGAGTCGATGGAGATTATCGCCGCGCACCAGGCAACGCTTGCCGGTGTAATGATTTCCCTGGACAGGCAGGAAAAAGGG CGCAGTGAGATTTCCGCTATTCAGGAGGTGGAGCGGGATTATCACTGCCAGGTGCTTGCCATCATCACGTTGGCGGATTT AATCGCCTATCTGGAAGAAAAAGGCGAAATGGCCGGCCATCTCGCCGCGGTCCGTGCCTATCAGCAGCAATACGGCATTT AA
Upstream 100 bases:
>100_bases GCATCTTGGTAACGGCCATTTTATCATCCCCCCGGCGCTGATACCTTTCAGGTACTCTGCACCATAGCTTGTCCAACCCA CCGGTGAGGAGTAACAGTCC
Downstream 100 bases:
>100_bases ACGGGCCGGGCGAGACGGGCGTTCCGCGTTGGTGCCGATCGTTGTAAAGGTGCGTCGCGGCGCTCAGTGCAGCTGCGCTA CCAAAAGCGGCCAGCGTAGC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKEYQSKFIEYALNKQVLKFGEFTLKSGRISPYFFNAGLFNTGRDLAFLGRVYAAALMDSGVRFDVLFGPAYKGIPIATT TAVALAEQHQRDVPYCFNRKEAKDHGEGGTLVGSPLQGKVMLVDDVITAGTAIRESMEIIAAHQATLAGVMISLDRQEKG RSEISAIQEVERDYHCQVLAIITLADLIAYLEEKGEMAGHLAAVRAYQQQYGI
Sequences:
>Translated_213_residues MKEYQSKFIEYALNKQVLKFGEFTLKSGRISPYFFNAGLFNTGRDLAFLGRVYAAALMDSGVRFDVLFGPAYKGIPIATT TAVALAEQHQRDVPYCFNRKEAKDHGEGGTLVGSPLQGKVMLVDDVITAGTAIRESMEIIAAHQATLAGVMISLDRQEKG RSEISAIQEVERDYHCQVLAIITLADLIAYLEEKGEMAGHLAAVRAYQQQYGI >Mature_213_residues MKEYQSKFIEYALNKQVLKFGEFTLKSGRISPYFFNAGLFNTGRDLAFLGRVYAAALMDSGVRFDVLFGPAYKGIPIATT TAVALAEQHQRDVPYCFNRKEAKDHGEGGTLVGSPLQGKVMLVDDVITAGTAIRESMEIIAAHQATLAGVMISLDRQEKG RSEISAIQEVERDYHCQVLAIITLADLIAYLEEKGEMAGHLAAVRAYQQQYGI
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Homo sapiens, GI4507835, Length=181, Percent_Identity=25.414364640884, Blast_Score=81, Evalue=8e-16, Organism=Escherichia coli, GI1790073, Length=213, Percent_Identity=81.6901408450704, Blast_Score=363, Evalue=1e-102, Organism=Caenorhabditis elegans, GI17508631, Length=196, Percent_Identity=27.5510204081633, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6323530, Length=220, Percent_Identity=48.6363636363636, Blast_Score=205, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6323927, Length=221, Percent_Identity=44.7963800904977, Blast_Score=192, Evalue=4e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 23458; Mature: 23458
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYQSKFIEYALNKQVLKFGEFTLKSGRISPYFFNAGLFNTGRDLAFLGRVYAAALMDS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC GVRFDVLFGPAYKGIPIATTTAVALAEQHQRDVPYCFNRKEAKDHGEGGTLVGSPLQGKV CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCEECCCCCCCE MLVDDVITAGTAIRESMEIIAAHQATLAGVMISLDRQEKGRSEISAIQEVERDYHCQVLA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCHHHHH IITLADLIAYLEEKGEMAGHLAAVRAYQQQYGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKEYQSKFIEYALNKQVLKFGEFTLKSGRISPYFFNAGLFNTGRDLAFLGRVYAAALMDS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCC GVRFDVLFGPAYKGIPIATTTAVALAEQHQRDVPYCFNRKEAKDHGEGGTLVGSPLQGKV CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCEECCCCCCCE MLVDDVITAGTAIRESMEIIAAHQATLAGVMISLDRQEKGRSEISAIQEVERDYHCQVLA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHCHHHHH IITLADLIAYLEEKGEMAGHLAAVRAYQQQYGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA