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The map label for this gene is yjbQ [H]

Identifier: 85060108

GI number: 85060108

Start: 3700009

End: 3700422

Strand: Reverse

Name: yjbQ [H]

Synonym: SG2130

Alternate gene names: 85060108

Gene position: 3700422-3700009 (Counterclockwise)

Preceding gene: 85060109

Following gene: 85060106

Centisome position: 88.71

GC content: 52.9

Gene sequence:

>414_bases
GTGGCACCAACAGACCCTGAAAGCCCGCCGTGCACGTGCAGCTTTCATTTGGTCACGGATGAAATCGTTTCTCAACTGAC
GTCGCTAAGCGCAGTCCGCACCGGGTTGCTGCATTTATTGCTGCAGCATACTTCCGCATCTTTGACGCTCAATGAAAATT
GCGATCCCACCGTCAGAACCGATATGGAAAACCATTTTTTACGTCAGGTTCCGGAATCGGCCCCCTATCTGCACGATGAT
GAAGGGGCGGATGATATGCCGGCGCATATCAAATCTTCTCTGCTTGGCAGCTCACTGTTATTGCCCGTCGGGCATGGCAC
GCTGTTGTTGGGTACCTGGAAAGGTATTTGGCTGGACGAACATCGTAACCGTGGCGGCCGCCGCCGTATTGTCTCCACTT
TACAGGGAGAATAA

Upstream 100 bases:

>100_bases
GAGGCCTTCGCGGCAGTGCAGTAATCGCCCTGCCGTGACCGGTTTTCACCTGTTCCCGCGTTGCCACTATACTAAGTGAT
CAACAAAGGAGCAGGATTAC

Downstream 100 bases:

>100_bases
TTCATGGACCAATCGACGCTATTGAGTTACTGCATGACAAAACCGGGCGCTGTGCAGAGCGTTCGTCAAGAGTGGCAGGC
TAACCAGGTGAAAGTCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MAPTDPESPPCTCSFHLVTDEIVSQLTSLSAVRTGLLHLLLQHTSASLTLNENCDPTVRTDMENHFLRQVPESAPYLHDD
EGADDMPAHIKSSLLGSSLLLPVGHGTLLLGTWKGIWLDEHRNRGGRRRIVSTLQGE

Sequences:

>Translated_137_residues
MAPTDPESPPCTCSFHLVTDEIVSQLTSLSAVRTGLLHLLLQHTSASLTLNENCDPTVRTDMENHFLRQVPESAPYLHDD
EGADDMPAHIKSSLLGSSLLLPVGHGTLLLGTWKGIWLDEHRNRGGRRRIVSTLQGE
>Mature_136_residues
APTDPESPPCTCSFHLVTDEIVSQLTSLSAVRTGLLHLLLQHTSASLTLNENCDPTVRTDMENHFLRQVPESAPYLHDDE
GADDMPAHIKSSLLGSSLLLPVGHGTLLLGTWKGIWLDEHRNRGGRRRIVSTLQGE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=123, Percent_Identity=70.7317073170732, Blast_Score=179, Evalue=7e-47,
Organism=Drosophila melanogaster, GI221476594, Length=121, Percent_Identity=54.5454545454545, Blast_Score=137, Evalue=2e-33,
Organism=Drosophila melanogaster, GI221476589, Length=122, Percent_Identity=54.0983606557377, Blast_Score=136, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15044; Mature: 14913

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTDPESPPCTCSFHLVTDEIVSQLTSLSAVRTGLLHLLLQHTSASLTLNENCDPTVRT
CCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
DMENHFLRQVPESAPYLHDDEGADDMPAHIKSSLLGSSLLLPVGHGTLLLGTWKGIWLDE
CHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCEEECH
HRNRGGRRRIVSTLQGE
HCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
APTDPESPPCTCSFHLVTDEIVSQLTSLSAVRTGLLHLLLQHTSASLTLNENCDPTVRT
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
DMENHFLRQVPESAPYLHDDEGADDMPAHIKSSLLGSSLLLPVGHGTLLLGTWKGIWLDE
CHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCEEEEECCCCEEECH
HRNRGGRRRIVSTLQGE
HCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]