Click here to switch to the map view.

The map label for this gene is ssb [H]

Identifier: 85060106

GI number: 85060106

Start: 3695840

End: 3696367

Strand: Reverse

Name: ssb [H]

Synonym: SG2128

Alternate gene names: 85060106

Gene position: 3696367-3695840 (Counterclockwise)

Preceding gene: 85060108

Following gene: 85060104

Centisome position: 88.62

GC content: 62.12

Gene sequence:

>528_bases
ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTAGTCGGAAACCTGGGCCAGGATCCAGAAGTCCGCCATATGCCTAATGG
TGGTGCGGTAGCCAACATTACGCTGGCCACCTCGGAGAGCTGGCGCGACAAGCAGACCGGCGAGACCAAGGAGAAAACGG
AATGGCACCGCGTGGTGCTGTTTGGCAAACTGGCCGAGGTGGCGGGCGAATATCTGCGTAAAGGCTCCCAGGTGTATATC
GAGGGATCGCTGCAAACTCGCAAGTGGCAGGACCAGAGCGGTCAGGATCGCTACACCACCGAAGTCGTGGTCAATGTGGG
CGGCACCATGCAAATGCTCGGGGGCCGTCAGGGCGGCGCGGCGGCCAGCGGCGGCCAGCAGAGCGGCTGGGGCCTGCCTC
AGCAGCCGCAGGGCAATAATGCGCAGTTCAGCGGCGGTAATGCACCGGCGTCGCGCCGCGCGCAGAACAGCGCTCCGGCG
CCCAGCAATGAGCCGCCGATGGACTTTGATGACGATATTCCATTCTGA

Upstream 100 bases:

>100_bases
TGGACAGTCCAAGTTTCAAAACATGTTCTTTAAGCGTTGGCAATGGTAAACTTGAGCGATTAAACTTAGTCATTCATCTT
ATCATTATCAGGAGACCCCC

Downstream 100 bases:

>100_bases
GGTTAACCTTAGACAACCTTGTCAAAGCTGCGAAAAAAAACCTCCTATGAGCATGAGGTTTTTTTGACGAAAGAGCCTCC
GTATGTAGACGCGGACGTTG

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MASRGVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNVGGTMQMLGGRQGGAAASGGQQSGWGLPQQPQGNNAQFSGGNAPASRRAQNSAPA
PSNEPPMDFDDDIPF

Sequences:

>Translated_175_residues
MASRGVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGSLQTRKWQDQSGQDRYTTEVVVNVGGTMQMLGGRQGGAAASGGQQSGWGLPQQPQGNNAQFSGGNAPASRRAQNSAPA
PSNEPPMDFDDDIPF
>Mature_174_residues
ASRGVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYIE
GSLQTRKWQDQSGQDRYTTEVVVNVGGTMQMLGGRQGGAAASGGQQSGWGLPQQPQGNNAQFSGGNAPASRRAQNSAPAP
SNEPPMDFDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=111, Percent_Identity=34.2342342342342, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1790494, Length=181, Percent_Identity=79.5580110497238, Blast_Score=260, Evalue=4e-71,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18755; Mature: 18624

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRGVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTEWHRVVL
CCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHEEHHH
FGKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQSGQDRYTTEVVVNVGGTMQMLGGRQGGA
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCC
AASGGQQSGWGLPQQPQGNNAQFSGGNAPASRRAQNSAPAPSNEPPMDFDDDIPF
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASRGVNKVILVGNLGQDPEVRHMPNGGAVANITLATSESWRDKQTGETKEKTEWHRVVL
CCCCCCEEEEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHEEHHH
FGKLAEVAGEYLRKGSQVYIEGSLQTRKWQDQSGQDRYTTEVVVNVGGTMQMLGGRQGGA
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCCCCC
AASGGQQSGWGLPQQPQGNNAQFSGGNAPASRRAQNSAPAPSNEPPMDFDDDIPF
CCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]